NGS QC Toolkit: a toolkit for quality check and filtering of next generation sequencing data of Roche and Illumina technology (http://www.nipgr.res.in/ngsqctoolkit.html)
☆16Mar 19, 2021Updated 5 years ago
Alternatives and similar repositories for NGSQCToolkit
Users that are interested in NGSQCToolkit are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- A complete telomere-to-telomere assembly of sheep: T2T-sheep1.0☆21Nov 2, 2024Updated last year
- Annotate your metagenome assemblies☆11Jul 19, 2018Updated 7 years ago
- a gap-filling tools of genome in complex region.☆25Dec 30, 2025Updated 2 months ago
- A Toolkit for analyzing next-generation DNA Re-Sequencing data☆15Feb 15, 2022Updated 4 years ago
- My implementation of zmodem: https://noodle1983.github.io/2021/02/12/rzsz-nd_README/☆21Mar 18, 2025Updated last year
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click and start building anything your business needs.
- ☆12Sep 4, 2022Updated 3 years ago
- Official code repository for the paper READRetro: Natural Product Biosynthesis Planning with Retrieval-Augmented Dual-View Retrosynthesis☆22Jun 8, 2024Updated last year
- A standalone end-to-end data analysis pipeline for Duplex Sequencing☆21Oct 25, 2023Updated 2 years ago
- A pipeline for genomic variant detection with genome assemblies at population scale☆39Jun 3, 2025Updated 9 months ago
- Visualing species tree from ASTRAL with gene tree discordance☆28May 13, 2025Updated 10 months ago
- a toolkit for evaluation of the lenght of k-mer in a given genome dataset for alignment-free phylogenimic analysis.☆15Nov 21, 2024Updated last year
- PhyloForge: Unifying micro and macro evolution with comprehensive genomic signals☆10May 17, 2024Updated last year
- a re-packaging of the sankey plot function for kraken reports taken from pavian and sankeyD3 from Florian Breitwieser☆15Dec 5, 2025Updated 3 months ago
- ☆17Jan 14, 2026Updated 2 months ago
- DigitalOcean Gradient AI Platform • AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- ☆29Jul 16, 2022Updated 3 years ago
- Filter and prioritize fusion calls☆20Feb 24, 2026Updated last month
- This tool estimates the completeness of KEGG pathway modules from the presence or absence of KEGG orthologues (KOs)☆34Jan 19, 2026Updated 2 months ago
- genome annotation (RNAseq and TE) pipeline (draft)☆13Aug 26, 2025Updated 7 months ago
- Post-verkko graph and assembly curation in Python.☆18Feb 11, 2026Updated last month
- A repository of notes, code, slides, and resources for the MetaPathways tutorial being held February 2014 at UBC.☆18Mar 9, 2015Updated 11 years ago
- Calculate the normalizing factors for zeroinflated sequencing data such as microbiome sequencing data☆16Jan 31, 2025Updated last year
- ☆15Nov 7, 2014Updated 11 years ago
- Robust identification of orthologous Synteny with the Orthology Index☆41Mar 1, 2026Updated 3 weeks ago
- Proton VPN Special Offer - Get 70% off • AdSpecial partner offer. Trusted by over 100 million users worldwide. Tested, Approved and Recommended by Experts.
- Scotch pipeline for indel calling.☆10Nov 25, 2019Updated 6 years ago
- Explore potential Biosynthetic Gene Clusters in plant genomes. This tool is originally sourced from antiSMASH 4.0.☆35Feb 26, 2026Updated last month
- 高仿⎣一个-ONE⎤App的开源项目☆23Oct 18, 2017Updated 8 years ago
- MI-BCI is the acronym for minimal invasive brain-computer interface (BCI). The repository is the sample code for the paper "Intracranial…☆10Jun 12, 2022Updated 3 years ago
- A snakemake workflow for de novo genome assembly. It produces chromosome-scale primary/phased assemblies complete with organelles (mitoch…☆33May 14, 2025Updated 10 months ago
- 使用Python Flask开发的一个web可视化的server监控程序，目前可以实时的监控http server和redis server的信息。☆10May 25, 2016Updated 9 years ago
- ☆10May 17, 2022Updated 3 years ago
- Telomere compliment tools☆28Nov 17, 2025Updated 4 months ago
- ☆45Dec 11, 2025Updated 3 months ago
- Wordpress hosting with auto-scaling on Cloudways • AdFully Managed hosting built for WordPress-powered businesses that need reliable, auto-scalable hosting. Cloudways SafeUpdates now available.
- Processing and analysis of data coming from Illumina sequencing machines☆10Mar 14, 2026Updated 2 weeks ago
- A set of R functions that help faciliate a lot of tedious processing☆18Aug 31, 2018Updated 7 years ago
- Algorithm to implement Fraction and Allelic Copy number Estimate from Tumor/normal Sequencing using unmatched normal sample(s) for log ra…☆12Sep 15, 2023Updated 2 years ago
- Writing a custom connection for R☆16May 15, 2025Updated 10 months ago
- Computational Analysis of Gene Expression Evolution☆45Aug 19, 2025Updated 7 months ago
- TR annotation tool VAMPIRE☆18Updated this week
- Gene Ontology (GO) enrichment analysis☆12Aug 7, 2023Updated 2 years ago