Source code and binaries for the SOAP2 alignment tool developed by BGI.
☆10Dec 22, 2023Updated 2 years ago
Alternatives and similar repositories for bgi-soap2
Users that are interested in bgi-soap2 are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- A Tool for integrated Quality Control and Preprocessing on FASTQ or BAM/CRAM files☆115Mar 28, 2024Updated 2 years ago
- CORNAS is a fast method for reliable DEG calls in unreplicated conditions.☆13Jul 14, 2019Updated 7 years ago
- annotation base on snakemake☆12May 29, 2024Updated 2 years ago
- An individual-based, eco-evolutionary model for spatially-explicit simulation of population viability in landscape demogenetics☆15Jun 26, 2026Updated 3 weeks ago
- Program for finding horizontal gene transfer using BLAST result☆11May 26, 2023Updated 3 years ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- BamDeal: a comprehensive toolkit for bam manipulation☆15Dec 21, 2022Updated 3 years ago
- 把生物信息的一些常用资源整理成一个生信导航网页。☆23Sep 6, 2025Updated 10 months ago
- GenomeThreader gene prediction software.☆14Nov 10, 2025Updated 8 months ago
- A tool to infer TF regulators for gene modules.☆11May 11, 2021Updated 5 years ago
- Reproducibility Repo for mvTCR paper☆13Apr 2, 2024Updated 2 years ago
- Holds the code and data to reproduce the analyses of Danaher & Kim et a;, "Advances in mixed cell deconvolution enable quantification of …☆12Dec 8, 2021Updated 4 years ago
- Mathematical Modeling Toolbox with R☆18Updated this week
- my blog☆10Oct 21, 2016Updated 9 years ago
- Single-Cell Sequencing Quality Control and Processing Software☆16Mar 26, 2022Updated 4 years ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- Estimating gene family turnover rates by likelihood-based methods☆12Aug 17, 2020Updated 5 years ago
- Modeling gene duplication, loss, and coalescence (through parsimony)☆10Jun 18, 2020Updated 6 years ago
- ParaFly - parallel cmd processing utility☆15Aug 10, 2021Updated 4 years ago
- R package for SIGMA, a clusterability measure for scRNA-seq data☆13Dec 15, 2021Updated 4 years ago
- Evaluation framework for computationally inferred gene networks from single-cell data.☆19Oct 23, 2025Updated 9 months ago
- Pipeline for homeobox gene identification☆11Aug 8, 2023Updated 2 years ago
- Modeling the genomic regulatory codes of fly, mouse, worm, and fish with deep learning☆17Apr 6, 2021Updated 5 years ago
- Deep & Cross Network in Tensorflow☆15May 30, 2018Updated 8 years ago
- 一个基于Arduino的魔方复原机器人,使用Python结合Machine Learning和OpenCV。☆17Aug 5, 2021Updated 4 years ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- ☆14Nov 1, 2021Updated 4 years ago
- Finding cryptic relationships to boost disease gene detection☆12May 31, 2023Updated 3 years ago
- Sentieon DNAscope + Machine Learning Model☆12Mar 19, 2025Updated last year
- Sweep-line algorithm for genomic features. Detect overlaps on large files w/ minimal memory.☆10Sep 13, 2011Updated 14 years ago
- Zotero Literature Library Integration for External Knowledge Base using RAG☆20Feb 26, 2025Updated last year
- Implements a modified version of the CUSUM algorithm for robust detection of step-like changes time-series data☆15Jul 2, 2020Updated 6 years ago
- ☆18Aug 14, 2024Updated last year
- SV genotyping with long reads☆40Jul 3, 2023Updated 3 years ago
- Scripts accompanying "Microanatomy of the human atherosclerotic plaque by single-cell transcriptomics"☆12Apr 20, 2022Updated 4 years ago
- Simple, predictable pricing with DigitalOcean hosting • AdAlways know what you'll pay with monthly caps and flat pricing. Enterprise-grade infrastructure trusted by 600k+ customers.
- ☆13Apr 24, 2023Updated 3 years ago
- Ancestral flowering plant genomes reconstruction☆14Jan 23, 2023Updated 3 years ago
- ☆19Oct 21, 2024Updated last year
- Guided Auto Encoder☆17Jul 27, 2017Updated 8 years ago
- 数学建模:算法与编程实现书籍配套资料☆19Jan 10, 2023Updated 3 years ago
- tabix file access with golang using biogo machinery☆10Jul 1, 2025Updated last year
- default laravel project with bootstrap material☆10Feb 2, 2016Updated 10 years ago