☆27May 16, 2026Updated 3 months ago
Alternatives and similar repositories for Pepbridge
Users that are interested in Pepbridge are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- ☆14Mar 31, 2026Updated 4 months ago
- ☆18Jun 1, 2026Updated 2 months ago
- Environment for developing substructure-aware protein models☆16Mar 26, 2026Updated 5 months ago
- Official implementation for our paper: Repurposing AlphaFold3-like Protein Folding Models for Antibody Sequence and Structure Co-design☆48Jan 8, 2026Updated 7 months ago
- Sidechain conditioning and modeling for full-atom protein sequence design☆149Nov 11, 2025Updated 9 months ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- ☆15Mar 5, 2026Updated 5 months ago
- Fast protein backbone flexibility prediction model☆36Jan 4, 2026Updated 7 months ago
- PREVENT: PRotein Engineering by Variational frEe eNergy approximaTion☆13Jul 4, 2024Updated 2 years ago
- A modular and user-friendly Python framework for protein and ligand engineering workflows on SLURM clusters☆104Jul 28, 2026Updated last month
- Graphormer Based Protein Sequence Design☆26Feb 2, 2024Updated 2 years ago
- ☆17Dec 25, 2025Updated 8 months ago
- ☆17Jan 5, 2024Updated 2 years ago
- Unified all-atom structure-conditioned molecule generation☆22Nov 21, 2025Updated 9 months ago
- Generalised Flow Maps official implementation (ICLR 2026).☆28Oct 30, 2025Updated 10 months ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- All-atom generative protein design using SE(3) flow matching☆28Feb 3, 2026Updated 6 months ago
- Deconvolving mutation effects on protein stability and function with disentangled protein language models☆18May 15, 2026Updated 3 months ago
- SableBind is an open-source framework dedicated to predicting protein-ligand binding affinity☆13Feb 6, 2025Updated last year
- ☆35Updated this week
- ☆15Jun 19, 2026Updated 2 months ago
- [JCIM 2026] Biasing Conformational Sampling in AlphaFold 3 and Boltz-2 via Pair Representation Scaling☆32Aug 20, 2026Updated last week
- Codebase for SigmaDock: Untwisting Molecular Docking with SE(3) Fragmented Diffusion☆98Apr 7, 2026Updated 4 months ago
- A flow matching model for generating conformational ensembles of protein backbones.☆50May 22, 2026Updated 3 months ago
- Updated Protpardelle models with more robust motif scaffolding and multichain support☆83May 1, 2026Updated 3 months ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- ML-based ligand generator☆23May 8, 2026Updated 3 months ago
- Protein Engineering via Exploration of an Energy Landscape☆143Aug 12, 2026Updated 2 weeks ago
- Structure prediction and design of proteins with noncanonical amino acids☆146Feb 1, 2026Updated 6 months ago
- ☆18May 16, 2026Updated 3 months ago
- ☆16Dec 10, 2024Updated last year
- Official repository of "ODesign: A World Model for Biomolecular Interaction Design"☆336Jul 1, 2026Updated last month
- Interpretable, protein structure-based prediction of missense variant deleteriousness.☆23Aug 6, 2025Updated last year
- DynamicGT: a dynamic-aware geometric transformer model to predict protein binding interfaces in flexible and disordered regions☆16Jun 18, 2026Updated 2 months ago
- Code fo ICLR2025 paper "A Simple yet Effective DDG Predictor is An Unsupervised Antibody Optimizer and Explainer"☆24Jul 18, 2025Updated last year
- Simple, predictable pricing with DigitalOcean hosting • AdAlways know what you'll pay with monthly caps and flat pricing. Enterprise-grade infrastructure trusted by 600k+ customers.
- DFMDock (Denoising Force Matching Dock), a diffusion model that unifies sampling and ranking within a single framework.☆56Jul 22, 2025Updated last year
- MaSIF-neosurf: surface-based protein design for ternary complexes.☆178Jun 25, 2026Updated 2 months ago
- ☆13Updated this week
- ☆27Jun 2, 2026Updated 2 months ago
- Official implementation for LigUnity: Hierarchical affinity landscape navigation through learning a shared pocket-ligand space.☆63Mar 30, 2026Updated 5 months ago
- ☆15Jun 25, 2026Updated 2 months ago
- Interaction profile extraction, scoring, alignment and evaluation of ShEPhERD. [ICLR 2025]☆38Jul 15, 2026Updated last month