Alternatives and similar repositories for pdb_to_cm

Users that are interested in pdb_to_cm are comparing it to the libraries listed below

• FangpingWan / DeepCPI
  ☆17Updated 5 years ago
• gv20-therapeutics / antibody-in-pytorch
  Machine learning models for antibody sequences in PyTorch
  ☆41Updated 4 years ago
• Furman-Lab / Peptide_docking_with_AF2_and_RosettAfold
  Code and data used in https://doi.org/10.1101/2021.08.01.454656
  ☆54Updated 3 years ago
• MartinThoma / propy3
  A Python 3 version of the protein descriptor package propy
  ☆46Updated 2 years ago
• skinnider / low-data-generative-models
  ☆20Updated 4 years ago
• dwhswenson / contact_map
  Contact map analysis for biomolecules; based on MDTraj
  ☆46Updated 11 months ago
• deep-scaffold / deep_scaffold
  ☆25Updated 6 years ago
• Actelion / openchemlib-hyperspace
  substructure search in large combinatorial spaces using openchemlib
  ☆22Updated 4 months ago
• LBBSoft / DeepCDA
  DeepCDA
  ☆15Updated 5 years ago
• zhenglz / onionnet
  A multiple-layer inter-molecular contact features based deep neural network for protein-ligand binding affinity prediction
  ☆81Updated 5 years ago
• guangyu-zhou / MuPIPR
  ☆24Updated 4 years ago
• jivankandel / PUResNet
  Predicting protein-ligand binding sites using deep convolutional neural network
  ☆50Updated last year
• AspirinCode / iPPIGAN
  De novo molecular design with deep molecular generative models for protein-protein interaction(PPI) inhibitors
  ☆20Updated last year
• maxime-langevin / scaffold-constrained-generation
  ☆40Updated 5 years ago
• rdkit / UGM_2018
  2018 RDKit UGM
  ☆14Updated 7 years ago
• smiles724 / MROT
  ☆12Updated 5 months ago
• fimrie / DeLinker
  ☆38Updated 4 years ago
• jacquesboitreaud / OptiMol
  Optimization of binding affinities in chemical space for drug discovery
  ☆35Updated 2 years ago
• sirimullalab / DLSCORE
  DLSCORE: A deep learning based scoring function for predicting protein-ligand binding affinity
  ☆48Updated 2 years ago
• DS3Lab / RosENet
  ☆37Updated 4 years ago
• bm2-lab / X-MOL
  ☆38Updated 4 years ago
• rochoa85 / PepFun
  Bioinformatics and Cheminformatics protocols for peptide analysis
  ☆43Updated 2 years ago
• wendao / CAGE-Prox
  Computer aided proximal decaging as a universal strategy for temporal protein activation
  ☆24Updated 6 months ago
• KailiWang1 / DeepDTAF
  a deep learning architecture for protein-ligand binding affinity prediction
  ☆76Updated last year
• sarisabban / RamaNet
  Preforms De novo protein design using machine learning and PyRosetta to generate a novel protein structure
  ☆52Updated 9 months ago
• alexarnimueller / LSTM_peptides
  Long short-term memory recurrent neural networks for learning peptide and protein sequences to later design new, similar examples.
  ☆77Updated 2 years ago
• prokia / BioNavi-NP
  Biosynthesis Navigator for Natural Products
  ☆52Updated 3 years ago
• kiharalab / Emap2sec
  Emap2sec is a computational tool to identify protein secondary structures
  ☆16Updated last year
• jenniening / deltaVinaXGB
  This is a machine-learning based protein-ligand scoring function.
  ☆52Updated 5 years ago
• Graylab / deepH3-distances-orientations
  ☆35Updated 4 years ago