SimonLarsen / pdb_to_cmLinks
Compute protein contact map from PDB file.
☆11Updated 8 years ago
Alternatives and similar repositories for pdb_to_cm
Users that are interested in pdb_to_cm are comparing it to the libraries listed below
Sorting:
- ☆17Updated 5 years ago
- A Python 3 version of the protein descriptor package propy☆46Updated 2 years ago
- Long short-term memory recurrent neural networks for learning peptide and protein sequences to later design new, similar examples.☆77Updated 2 years ago
- Machine learning models for antibody sequences in PyTorch☆41Updated 4 years ago
- ☆20Updated 4 years ago
- Guided Conditional Wasserstein GAN for De Novo Protein Design☆37Updated 4 years ago
- ☆87Updated 3 years ago
- Biosynthesis Navigator for Natural Products☆52Updated 3 years ago
- HoTS: Sequence-based prediction of binding regions and drug-target interactions.☆28Updated 3 years ago
- DLSCORE: A deep learning based scoring function for predicting protein-ligand binding affinity☆48Updated 2 years ago
- Code for the paper "DLAB - Deep learning methods for structure-basedvirtual screening of antibodies"☆31Updated 3 years ago
- A python package for computer-aid drug design.☆37Updated 2 weeks ago
- A repository of compound-target annotations in support of Systematic Chemogenetic Library Assembly☆17Updated 5 years ago
- Bioinformatics and Cheminformatics protocols for peptide analysis☆43Updated 2 years ago
- ☆25Updated 5 years ago
- Graph Neural Networks for Drug Efficacy Prediction☆11Updated 3 years ago
- ☆23Updated 4 years ago
- ☆38Updated 4 years ago
- Emap2sec is a computational tool to identify protein secondary structures☆16Updated last year
- Code and data used in https://doi.org/10.1101/2021.08.01.454656☆54Updated 3 years ago
- Multi-Channel Deep Chemogenomic Modeling of Receptor-Ligand Binding Affinity Prediction for Drug Discovery☆28Updated 4 years ago
- ☆33Updated last year
- De novo molecular design with deep molecular generative models for protein-protein interaction(PPI) inhibitors☆20Updated last year
- A platform for systematic ADME evaluation of drug molecules, thereby accelerating the drug discovery process.☆75Updated last year
- ☆29Updated 5 years ago
- A deep learning framework for predicting interactions between protein-protein interaction targets and modulators☆14Updated last year
- This repository provides an implementation of the DTiGEMSplus tool, a network-based method for computational Drug-Target Interaction pred…☆27Updated 4 years ago
- Machine Learning Designs Non-Hemolytic Antimicrobial Peptides☆35Updated 4 years ago
- iScore: an MPI supported software for ranking protein-protein docking models based on a random walk graph kernel and support vector machi…☆31Updated 3 years ago
- a deep learning architecture for RNA-ligand binding sites prediction☆18Updated last year