Alternatives and similar repositories for pdb_to_cm:

Users that are interested in pdb_to_cm are comparing it to the libraries listed below

• FangpingWan / DeepCPI
  ☆16Updated 4 years ago
• xzenglab / TAGPPI
  ☆19Updated last year
• gv20-therapeutics / antibody-in-pytorch
  Machine learning models for antibody sequences in PyTorch
  ☆38Updated 3 years ago
• Furman-Lab / Peptide_docking_with_AF2_and_RosettAfold
  Code and data used in https://doi.org/10.1101/2021.08.01.454656
  ☆53Updated 2 years ago
• duolinwang / MusiteDeep_web
  This repository contains the stand-alone tool for MusiteDeep server
  ☆30Updated 4 years ago
• MartinThoma / propy3
  A Python 3 version of the protein descriptor package propy
  ☆41Updated 2 years ago
• Shen-Lab / Drug-Combo-Generator
  Deep Generative Models for Drug Combination (Graph Set) Generation given Hierarchical Disease Network Embedding
  ☆30Updated last year
• alexarnimueller / LSTM_peptides
  Long short-term memory recurrent neural networks for learning peptide and protein sequences to later design new, similar examples.
  ☆72Updated last year
• sarisabban / RamaNet
  Preforms De novo protein design using machine learning and PyRosetta to generate a novel protein structure
  ☆50Updated 3 years ago
• MahaThafar / Affinity2Vec
  Drug-target binding affinity prediction using representation learning, graph mining, and machine learning
  ☆24Updated 2 years ago
• multicom-toolbox / DNCON2
  Deep convolutional neural networks for protein contact map prediction
  ☆23Updated 5 years ago
• cansyl / MDeePred
  Multi-Channel Deep Chemogenomic Modeling of Receptor-Ligand Binding Affinity Prediction for Drug Discovery
  ☆27Updated 3 years ago
• HYsxe / ACME
  Supplementary data for the ACME algorithm
  ☆23Updated 2 years ago
• Liuxg16 / GeoPPI
  ☆80Updated 2 years ago
• simonfqy / PADME
  This is the repository containing the source code for my Master's thesis research, about predicting drug-target interaction using deep le…
  ☆42Updated 5 years ago
• ElwynWang / DeepFragLib
  ☆29Updated 4 years ago
• dahjan / DMS_opt
  ☆68Updated 4 years ago
• Graylab / deepH3-distances-orientations
  ☆34Updated 3 years ago
• dohlee / antiberty-pytorch
  An unofficial re-implementation of AntiBERTy, an antibody-specific protein language model, in PyTorch.
  ☆24Updated 11 months ago
• bm2-lab / X-MOL
  ☆34Updated 3 years ago
• hetong007 / SimBoost
  ☆7Updated 8 years ago
• gifford-lab / antibody-2019
  ☆32Updated 4 years ago
• ElofssonLab / PconsC4
  Fast and easy contact prediction.
  ☆38Updated 9 months ago
• duolinwang / CapsNet_PTM
  CapsNet for Protein Post-translational Modification site prediction.
  ☆25Updated 5 years ago
• JU-HuaY / MFR
  ☆10Updated last year
• biomed-AI / GraphSite
  GraphSite: protein-DNA binding site prediction using graph transformer and predicted protein structures
  ☆60Updated 7 months ago
• xinyu-dev / annotate_v
  Antibody Annotation - Annotate VH and VL sequences (FR and CDR) in Python
  ☆29Updated last year
• aqlaboratory / hsm
  Code associated with "Biophysical prediction of protein-peptide interactions and signaling networks using machine learning."
  ☆71Updated 10 months ago
• KeatingLab / PixelDB
  ☆13Updated 7 years ago
• GIST-CSBL / HoTS
  HoTS: Sequence-based prediction of binding regions and drug-target interactions.
  ☆26Updated 2 years ago