tiwarylab / DDPM_REMDLinks
Denoising diffusion probabilistic models for replica exchange
☆24Updated 3 years ago
Alternatives and similar repositories for DDPM_REMD
Users that are interested in DDPM_REMD are comparing it to the libraries listed below
Sorting:
- DiAMoNDBack: Diffusion-denoising Autoregressive Model for Non-Deterministic Backmapping of Cα Protein Traces☆19Updated 3 months ago
- Supporting data for the manuscript "Deep learning the slow modes for rare events sampling"☆20Updated last year
- Geometric super-resolution for molecular geometries☆41Updated 3 years ago
- Message Passing Neural Networks for Molecule Property Prediction☆45Updated 2 years ago
- Timewarp is a research project using deep learning to accelerate molecular dynamics simulation.☆56Updated last year
- Tutorials and data necessary to reproduce the results of publication Machine Learning Coarse-Grained Potentials of Protein Thermodynamics☆89Updated 7 months ago
- Flow-matching for coarse graining of miniproteins.☆18Updated 2 years ago
- ☆13Updated last year
- Implementation of "Denoise Pretraining on Non-equilibrium Molecular Conformations for Accurate and Transferable Neural Potentials" in PyT…☆14Updated 2 years ago
- [ICML 2025] Repurposing pre-trained score-based generative models for transition path sampling by minimizing the Onsager-Machlup (OM) act…☆18Updated last month
- Generative backmapping of coarse-grained molecular systems using an equivariant graph neural network and flow-matching☆10Updated 3 months ago
- ☆27Updated last year
- Code for the paper "JANUS: Parallel Tempered Genetic Algorithm Guided by Deep Neural Networks for Inverse Molecular Design"☆84Updated 3 years ago
- Example to fit parameters and run CG simulations using TorchMD and Schnet☆47Updated 3 years ago
- Code for extrapolation in materials property prediction as proposed in "Known Unknowns: Out-of-Distribution Property Prediction in Materi…☆22Updated 5 months ago
- [TMLR 2023] Training and simulating MD with ML force fields☆112Updated 10 months ago
- An E(3) Equivariant Variational Autoencoder for Molecular Linker Design☆47Updated 2 years ago
- The official repository of Uni-pKa☆66Updated 4 months ago
- A GFlowNet with a chemical synthesis action space.☆84Updated 6 months ago
- G-SchNet extension for SchNetPack☆60Updated 9 months ago
- ☆21Updated 6 years ago
- A Benchmarking Platform for Realistic And Practical Inverse Molecular Design☆77Updated 3 months ago
- Diffusion model for transition state prediction☆40Updated last year
- cG-SchNet - a conditional generative neural network for 3d molecular structures☆62Updated 2 years ago
- Unified Free Energy Dynamics (UFED) simulations with OpenMM☆35Updated last week
- ☆15Updated 3 years ago
- SO3krates and Universal Pairwise Force Field for Molecular Simulation☆109Updated last month
- A python package for performing GROMACS simulation ensembles☆16Updated 3 months ago
- Implementation of Differentiable Molecular Simulations with torchMD.☆15Updated last year
- Projecting Molecules into Synthesizable Chemical Spaces (ICML 2024)☆43Updated 3 weeks ago