RyanDsilva / medical-nerLinks
Clinical NER with UMLS lookup
☆22Updated 5 years ago
Alternatives and similar repositories for medical-ner
Users that are interested in medical-ner are comparing it to the libraries listed below
Sorting:
- A short tutorial to map biomedical free-text into UMLS concepts using MetaMap☆30Updated 2 years ago
- Medical Relations and Entities Extraction☆37Updated 3 years ago
- NER and Relation Extraction from Electronic Health Records (EHR).☆89Updated 3 years ago
- Spacy pipeline object for extracting values that correspond to a named entity (e.g., birth dates, account numbers, laboratory results)☆55Updated 3 years ago
- Implementation and demo of explainable coding of clinical notes with Hierarchical Label-wise Attention Networks (HLAN)☆62Updated 3 years ago
- Corpus of Online Medical EnTities: the cometA corpus☆50Updated 7 months ago
- Estimate similarity of medical concepts based on Unified Medical Language System (UMLS)☆16Updated 3 years ago
- Clinical Text Summarization with Syntax-Based Negation and Semantic Concept Identification☆21Updated 5 years ago
- ☆99Updated 3 years ago
- Medical question and answer dataset gathered from the web.☆126Updated 4 years ago
- A project for developing transformer-based models for clinical relation extraction☆130Updated 2 years ago
- Adversarial Learning of Knowledge Embeddings for the Unified Medical Language System☆40Updated 5 years ago
- Notebook for BERT medical named entity recognition☆42Updated 3 years ago
- MedType: Improving Medical Entity Linking with Semantic Type Prediction☆116Updated 2 years ago
- Surfacing Semantic Data from Clinical Notes in Electronic Health Records for Tailored Care, Trial Recruitment and Clinical Research☆89Updated 2 years ago
- Pre-trained Language Model for Biomedical Question Answering☆123Updated 2 years ago
- PubMed PICO Element Detection Dataset☆58Updated 7 years ago
- Medical Text Mining and Information Extraction with spaCy☆440Updated 2 years ago
- Word embeddings trained on medical subreddits.☆10Updated 4 years ago
- A Python biomedical relation extraction package that uses a supervised approach (i.e. needs training data).☆158Updated 2 years ago
- ☆55Updated 5 years ago
- ML-Net is a novel end-to-end deep learning framework for multi-label classification of biomedical tasks. ML-Net combines the label predic…☆36Updated 5 years ago
- Text-to-SQL Generation for Question Answering on Electronic Medical Records☆131Updated 4 years ago
- CollaboNet for Biomedical Named Entity Recognition☆48Updated 6 years ago
- Weakly supervised medical named entity classification☆73Updated 2 years ago
- An Interactive Tool for Natural Language Processing on Clinical Text☆22Updated 4 years ago
- A clinical BERT-based NLP tool for parsing clinical trial abstracts following the PICO framework☆46Updated 4 years ago
- ICD-BERT: Multi-label Classification of ICD-10 Codes with BERT (CLEF 2019)☆76Updated 2 years ago
- Discovering Related Clinical Concepts using Large Amounts of Clinical Notes. An unsupervised graphical approach to mine related concepts …☆26Updated 7 years ago
- Named entity relevant project☆30Updated 5 years ago