Alternatives and similar repositories for clinical-kb-bert

Users that are interested in clinical-kb-bert are comparing it to the libraries listed below

• cambridgeltl / cometa
  Corpus of Online Medical EnTities: the cometA corpus
  ☆50Updated 8 months ago
• kbogas / medknow
  Medical Relations and Entities Extraction
  ☆37Updated 3 years ago
• lasigeBioTM / BiOnt
  BiOnt: Deep Learning using Multiple Biomedical Ontologies for Relation Extraction
  ☆27Updated last year
• gmichalo / UmlsBERT
  ☆100Updated 3 years ago
• GanjinZero / CODER
  CODER: Knowledge infused cross-lingual medical term embedding for term normalization. [JBI, ACL-BioNLP 2022]
  ☆79Updated 3 years ago
• acadTags / Explainable-Automated-Medical-Coding
  Implementation and demo of explainable coding of clinical notes with Hierarchical Label-wise Attention Networks (HLAN)
  ☆62Updated 3 years ago
• uf-hobi-informatics-lab / ClinicalTransformerRelationExtraction
  A project for developing transformer-based models for clinical relation extraction
  ☆130Updated 2 years ago
• lindvalllab / clinicalXLNet
  Clinical XLNet: Modeling Sequential Clinical Notes and Predicting Prolonged Mechanical Ventilation
  ☆50Updated 4 years ago
• r-mal / umls-embeddings
  Adversarial Learning of Knowledge Embeddings for the Unified Medical Language System
  ☆40Updated 5 years ago
• babylonhealth / medisim
  Medical Similarity Dataset creation from SNOMED
  ☆28Updated 3 years ago
• suamin / MIL-RBERT
  MIL-RBERT: A Data-driven Approach for Noise Reduction in Distantly Supervised Biomedical Relation Extraction (BioNLP @ ACL 2020)
  ☆20Updated 2 years ago
• GanjinZero / KeBioLM
  Improving Biomedical Pretrained Language Models with Knowledge [BioNLP 2021]
  ☆65Updated 2 years ago
• shreyashub / BioFLAIR
  BioFLAIR: Pretrained Pooled Contextualized Embeddings for Biomedical Sequence Labeling Tasks
  ☆42Updated 5 years ago
• isegura / DDICorpus
  ☆35Updated 5 years ago
• stonkgs / stonkgs
  Multimodal Transformers for biomedical text and Knowledge Graph data
  ☆35Updated 2 years ago
• svjan5 / medtype
  MedType: Improving Medical Entity Linking with Semantic Type Prediction
  ☆116Updated 2 years ago
• acadTags / Rare-disease-identification
  Rare disease identification from free-text clinical notes with ontologies and weak supervision
  ☆32Updated 2 years ago
• som-shahlab / trove
  Weakly supervised medical named entity classification
  ☆73Updated 2 years ago
• Andy-jqa / bioelmo
  BioELMo is a biomedical version of embeddings from language model (ELMo), pre-trained on PubMed abstracts.
  ☆32Updated 5 years ago
• wonjininfo / CollaboNet
  CollaboNet for Biomedical Named Entity Recognition
  ☆48Updated 6 years ago
• panushri25 / emrQA
  Code for the emrQA question answering dataset
  ☆150Updated 3 years ago
• cambridgeltl / sapbert
  [NAACL'21 & ACL'21] SapBERT: Self-alignment pretraining for BERT & XL-BEL: Cross-Lingual Biomedical Entity Linking.
  ☆209Updated 2 years ago
• HazyResearch / medical-ned-integration
  Cross-domain data integration for named entity disambiguation in biomedical text
  ☆11Updated 3 years ago
• Bin-Chen-Lab / metamap
  A short tutorial to map biomedical free-text into UMLS concepts using MetaMap
  ☆30Updated 2 years ago
• laituan245 / rescnn_bioel
  ☆25Updated 2 years ago
• NLPatVCU / multitasking_transformers
  Multitask Learning with Pretrained Transformers
  ☆38Updated 4 years ago
• jayded / evidence-inference
  Data and code from our "Inferring Which Medical Treatments Work from Reports of Clinical Trials", NAACL 2019. This work concerns inferrin…
  ☆65Updated 4 years ago
• smitkiri / ehr-relation-extraction
  NER and Relation Extraction from Electronic Health Records (EHR).
  ☆91Updated 3 years ago
• salrowili / BioM-Transformers
  BioM-Transformers: Building Large Biomedical Language Models with BERT, ALBERT and ELECTRA
  ☆37Updated last year
• kamalkraj / BioELECTRA
  BioELECTRA
  ☆50Updated 4 years ago