HazyResearch / medical-ned-integrationLinks
Cross-domain data integration for named entity disambiguation in biomedical text
☆11Updated 3 years ago
Alternatives and similar repositories for medical-ned-integration
Users that are interested in medical-ned-integration are comparing it to the libraries listed below
Sorting:
- ☆17Updated 4 years ago
- Multimodal Transformers for biomedical text and Knowledge Graph data☆34Updated 2 years ago
- MIL-RBERT: A Data-driven Approach for Noise Reduction in Distantly Supervised Biomedical Relation Extraction (BioNLP @ ACL 2020)☆19Updated 2 years ago
- Biomedical Entity Linking Benchmark☆13Updated 8 months ago
- SciFive: a text-text transformer model for biomedical literature☆96Updated last year
- 🧬 BioRelEx: Biological Relation Extraction Benchmark @ ACL BioNLP Workshop 2019☆19Updated 6 years ago
- Corpus of Online Medical EnTities: the cometA corpus☆50Updated 5 months ago
- Improving Biomedical Pretrained Language Models with Knowledge [BioNLP 2021]☆65Updated 2 years ago
- BioMedBERT: A Pre-trained Biomedical Language Model for QA and IR☆28Updated 4 years ago
- Entity Linking & discovery solution. Agarwal et al., "Entity Linking via Explicit Mention-Mention Coreference Modeling", NAACL 2022.☆27Updated last year
- A project for developing transformer-based models for clinical relation extraction☆129Updated last year
- Bio relation extraction labeled dataset☆45Updated 3 years ago
- Rare disease identification from free-text clinical notes with ontologies and weak supervision☆32Updated 2 years ago
- BioELECTRA☆51Updated 3 years ago
- ☆11Updated 5 years ago
- ☆19Updated 3 years ago
- Medical reasoning using large language models☆90Updated last year
- ☆49Updated 3 years ago
- EMNLP'2021: Can Language Models be Biomedical Knowledge Bases?☆57Updated 2 years ago
- Codes for paper: Mixture-of-Partitions: Infusing Large Biomedical Knowledge Graphs into BERT☆34Updated 3 years ago
- CODER: Knowledge infused cross-lingual medical term embedding for term normalization. [JBI, ACL-BioNLP 2022]☆80Updated 3 years ago
- [NAACL'21 & ACL'21] SapBERT: Self-alignment pretraining for BERT & XL-BEL: Cross-Lingual Biomedical Entity Linking.☆196Updated 2 years ago
- Using pretrained language models for biomedical knowledge graph completion.☆47Updated 3 years ago
- ☆25Updated last year
- A Dataset for Evaluating Contextualized Representation of Biomedical Concepts in Language Models☆9Updated last year
- Code for Stage-wise Fine-tuning for Graph-to-Text Generation☆26Updated 2 years ago
- Using Huggingface to generate relation expressions☆15Updated 4 years ago
- Embedding Recycling for Language models☆39Updated 2 years ago
- Downloads the entire pubmed abstracts☆9Updated 6 years ago
- Multitask Learning with Pretrained Transformers☆40Updated 4 years ago