HazyResearch / medical-ned-integration
Cross-domain data integration for named entity disambiguation in biomedical text
β11Updated 3 years ago
Alternatives and similar repositories for medical-ned-integration:
Users that are interested in medical-ned-integration are comparing it to the libraries listed below
- 𧬠BioRelEx: Biological Relation Extraction Benchmark @ ACL BioNLP Workshop 2019β19Updated 5 years ago
- Multimodal Transformers for biomedical text and Knowledge Graph dataβ33Updated last year
- Biomedical Entity Linking Benchmarkβ11Updated last month
- Bio relation extraction labeled datasetβ43Updated 2 years ago
- Using pretrained language models for biomedical knowledge graph completion.β46Updated 3 years ago
- Github repo for the Evaluation of ChatGPT Family of Models for Biomedical Reasoning and Classification, code and data | Paper: https://arβ¦β14Updated last year
- MIL-RBERT: A Data-driven Approach for Noise Reduction in Distantly Supervised Biomedical Relation Extraction (BioNLP @ ACL 2020)β19Updated last year
- Codes for paper: Mixture-of-Partitions: Infusing Large Biomedical Knowledge Graphs into BERTβ33Updated 2 years ago
- MedDistant19: Towards an Accurate Benchmark for Broad-Coverage Biomedical Relation Extraction (COLING 2022)β17Updated 2 years ago
- EMNLP'2021: Can Language Models be Biomedical Knowledge Bases?β55Updated last year
- β17Updated 4 years ago
- β18Updated 3 years ago
- β64Updated 2 years ago
- β24Updated 3 years ago
- Using Huggingface to generate relation expressionsβ15Updated 4 years ago
- β22Updated 4 years ago
- Weakly Supervised Text-to-SQL Parsing through Question Decompositionβ22Updated last year
- Corpus of Online Medical EnTities: the cometA corpusβ50Updated 9 months ago
- Entity Linking & discovery solution. Agarwal et al., "Entity Linking via Explicit Mention-Mention Coreference Modeling", NAACL 2022.β26Updated 9 months ago
- BiOnt: Deep Learning using Multiple Biomedical Ontologies for Relation Extractionβ26Updated last year
- β21Updated 3 years ago
- Improving Biomedical Pretrained Language Models with Knowledge [BioNLP 2021]β65Updated last year
- CascadER: Cross-Modal Cascading for Knowledge Graph Link Prediction (arXiv 22)β13Updated 2 years ago
- Rare disease identification from free-text clinical notes with ontologies and weak supervisionβ28Updated last year
- SMASHED is a toolkit designed to apply transformations to samples in datasets, such as fields extraction, tokenization, prompting, batchiβ¦β31Updated 8 months ago
- This repository contains the code accompanying the paper "Learning Informative Representations of Biomedical Relations with Latent Variabβ¦β14Updated 3 years ago
- Extracting biomedical relationships from literature with Snorkel πβ58Updated 3 years ago
- Source Code for ACL 2020 paper, "Rationalizing Medical Relation Prediction from Corpus-level Statistics"β12Updated 4 years ago
- β19Updated 2 years ago
- TwiMed: Twitter and PubMed Comparable Corpus of Drugs, Diseases, Symptoms and their Relationsβ11Updated 7 years ago