HazyResearch / medical-ned-integrationLinks
Cross-domain data integration for named entity disambiguation in biomedical text
☆11Updated 4 years ago
Alternatives and similar repositories for medical-ned-integration
Users that are interested in medical-ned-integration are comparing it to the libraries listed below
Sorting:
- ☆17Updated 5 years ago
- Multimodal Transformers for biomedical text and Knowledge Graph data☆34Updated 2 years ago
- 🧬 BioRelEx: Biological Relation Extraction Benchmark @ ACL BioNLP Workshop 2019☆19Updated 6 years ago
- SciFive: a text-text transformer model for biomedical literature☆98Updated last year
- Corpus of Online Medical EnTities: the cometA corpus☆49Updated 10 months ago
- Biomedical Entity Linking Benchmark☆14Updated last year
- Improving Biomedical Pretrained Language Models with Knowledge [BioNLP 2021]☆65Updated 2 years ago
- EMNLP'2021: Can Language Models be Biomedical Knowledge Bases?☆57Updated 2 years ago
- Bio relation extraction labeled dataset☆45Updated 3 years ago
- Using Huggingface to generate relation expressions☆15Updated 4 years ago
- Using pretrained language models for biomedical knowledge graph completion.☆47Updated 4 years ago
- BioMedBERT: A Pre-trained Biomedical Language Model for QA and IR☆31Updated 4 years ago
- ☆20Updated 4 years ago
- ☆11Updated 6 years ago
- Entity Linking & discovery solution. Agarwal et al., "Entity Linking via Explicit Mention-Mention Coreference Modeling", NAACL 2022.☆28Updated last year
- A project for developing transformer-based models for clinical relation extraction☆130Updated 2 years ago
- Medical reasoning using large language models☆92Updated 2 years ago
- ☆25Updated last year
- The corresponding code for our paper: A sequence-to-sequence approach for document-level relation extraction.☆64Updated last year
- This repository contains the PLOD Dataset for Abbreviation Detection released with our LREC 2022 publication☆12Updated 3 years ago
- Transformers for Clinical NLP☆26Updated 5 months ago
- Rare disease identification from free-text clinical notes with ontologies and weak supervision☆32Updated 2 years ago
- [NAACL'21 & ACL'21] SapBERT: Self-alignment pretraining for BERT & XL-BEL: Cross-Lingual Biomedical Entity Linking.☆213Updated 2 years ago
- CODER: Knowledge infused cross-lingual medical term embedding for term normalization. [JBI, ACL-BioNLP 2022]☆79Updated 3 years ago
- MIL-RBERT: A Data-driven Approach for Noise Reduction in Distantly Supervised Biomedical Relation Extraction (BioNLP @ ACL 2020)☆21Updated 2 years ago
- ☆67Updated 3 years ago
- a customzable pipeline for information extraction☆18Updated 7 months ago
- An exploratory, tutorial and analytical view of the Unified Medical Language System (UMLS) & the software/technologies provided via being…☆48Updated last year
- Clinical XLNet: Modeling Sequential Clinical Notes and Predicting Prolonged Mechanical Ventilation☆50Updated 4 years ago
- BioM-Transformers: Building Large Biomedical Language Models with BERT, ALBERT and ELECTRA☆37Updated last year