dhchenx / umls-similarityLinks
Estimate similarity of medical concepts based on Unified Medical Language System (UMLS)
☆16Updated 3 years ago
Alternatives and similar repositories for umls-similarity
Users that are interested in umls-similarity are comparing it to the libraries listed below
Sorting:
- An exploratory, tutorial and analytical view of the Unified Medical Language System (UMLS) & the software/technologies provided via being…☆43Updated last year
- Build a medical knowledge graph based on Unified Language Medical System (UMLS)☆21Updated 3 years ago
- Medical Relations and Entities Extraction☆36Updated 3 years ago
- ☆25Updated last month
- UMLS Graph database for semantic queries☆22Updated 2 years ago
- Don't worry about UMLS, RxNorm, SNOMED, or SemMedDB licensing - write code that knows how to download it automatically☆40Updated last year
- Tools to create a clinical knowledge graph from biomedical literature. Includes wrappers for NCBI Eutils, cTakes annotator and Neo4J☆16Updated last year
- Rare disease identification from free-text clinical notes with ontologies and weak supervision☆32Updated 2 years ago
- Surfacing Semantic Data from Clinical Notes in Electronic Health Records for Tailored Care, Trial Recruitment and Clinical Research☆89Updated 2 years ago
- ☆23Updated 2 years ago
- A simple interface to inspect, improve and add concepts to biomedical NER+L -> MedCAT.☆81Updated this week
- Platform enabling Rapid Annotation for Clinical Entity Recognition☆50Updated 3 years ago
- [under development] ETL materials to support proposal for CDM enhancements for clinical trial data☆24Updated 4 years ago
- A near real-time named-entity recognizer☆61Updated this week
- A Serverless Text Annotation Tool for Corpus Development☆56Updated 4 months ago
- OHDSI Ananke - A Tool for Mapping Between OHDSI Concept Identifiers to Unified Medical Language System (UMLS) identifiers☆14Updated 4 years ago
- ☆16Updated 4 years ago
- ☆67Updated 3 years ago
- A comprehensive NLP preprocessing package for clinical notes sentence boundary detection, tokenization☆31Updated last year
- SKR Web API: Python implementation☆42Updated last year
- A light-weighted UMLS-based data augmentation for biomedical NLP tasks including Named Entity Recognition and sentence classification.☆10Updated 4 years ago
- PyPI Package: An easy-to-use medication/drug code mapping tool☆19Updated last year
- Data structures and code to read/write BioC XML and Json.☆33Updated last year
- Python module to parse UMLS source files☆19Updated 2 years ago
- ☆55Updated 5 years ago
- Runtime repository for the SNOMED CT Entity Linking challenge on DrivenData☆14Updated last year
- Code for manipulating the structure of UMLS files and converting ontologies or sets of ontologies into a graph structure.☆41Updated 4 years ago
- Grounding of biomedical named entities with contextual disambiguation☆45Updated 2 months ago
- MIL-RBERT: A Data-driven Approach for Noise Reduction in Distantly Supervised Biomedical Relation Extraction (BioNLP @ ACL 2020)☆19Updated 2 years ago
- BioMedICUS: A biomedical and clinical NLP engine.☆19Updated 3 weeks ago