ncbi / bert_gtLinks
☆32Updated last year
Alternatives and similar repositories for bert_gt
Users that are interested in bert_gt are comparing it to the libraries listed below
Sorting:
- Benchmarking for Biomedical Natural Language Processing Tasks with a Domain Specific ALBERT☆29Updated 4 years ago
- ☆28Updated 2 years ago
- Improving Biomedical Pretrained Language Models with Knowledge [BioNLP 2021]☆65Updated 2 years ago
- Bio relation extraction labeled dataset☆45Updated 3 years ago
- [NAACL'21 & ACL'21] SapBERT: Self-alignment pretraining for BERT & XL-BEL: Cross-Lingual Biomedical Entity Linking.☆201Updated 2 years ago
- SciFive: a text-text transformer model for biomedical literature☆97Updated last year
- BiOnt: Deep Learning using Multiple Biomedical Ontologies for Relation Extraction☆27Updated last year
- ACL'2020: Biomedical Entity Representations with Synonym Marginalization☆172Updated 2 years ago
- Repository for student projects within biomedical text mining from Lund University☆55Updated 2 years ago
- MIL-RBERT: A Data-driven Approach for Noise Reduction in Distantly Supervised Biomedical Relation Extraction (BioNLP @ ACL 2020)☆20Updated 2 years ago
- Repository used to collect biomedical corpus on the Internet!☆35Updated 4 years ago
- Cross-type Biomedical Named Entity Recognition with Deep Multi-task Learning (Bioinformatics'19)☆136Updated last year
- ☆35Updated 4 years ago
- Codes for the EMNLP'2020 paper "Predicting Clinical Trial Results by Implicit Evidence Integration".☆14Updated 4 years ago
- CODER: Knowledge infused cross-lingual medical term embedding for term normalization. [JBI, ACL-BioNLP 2022]☆80Updated 3 years ago
- BERN2: an advanced neural biomedical namedentity recognition and normalization tool☆195Updated last year
- Biomedical NLP Corpus or Datasets.☆64Updated 3 years ago
- A neural named entity recognition and multi-type normalization tool for biomedical text mining☆178Updated 3 years ago
- BERT-based Biomedical Text Summarizer☆23Updated 5 years ago
- We evaluate many models used for biomedical and clinical nlp tasks, and train new models that perform much better.☆162Updated 4 years ago
- Generative Biomedical Entity Linking via Knowledge Base-Guided Pre-training and Synonyms-Aware Fine-tuning [NAACL 2022]☆19Updated 2 years ago
- A Keras implementation of the AAAI21 paper "a lightweight neural model for biomedical entity linking"☆53Updated 3 years ago
- Code and dataset of EMNLP 2020 paper "Infusing Disease Knowledge into BERT for Health Question Answering, Medical Inference and Disease N…☆68Updated 4 years ago
- EMNLP'2021: Can Language Models be Biomedical Knowledge Bases?☆57Updated 2 years ago
- BLUE benchmark consists of five different biomedicine text-mining tasks with ten corpora.☆297Updated 3 years ago
- CollaboNet for Biomedical Named Entity Recognition☆48Updated 6 years ago
- A project for developing transformer-based models for clinical relation extraction☆129Updated 2 years ago
- DeepEventMine: End-to-end Neural Nested Event Extraction from Biomedical Texts☆94Updated 2 years ago
- PyTorch Implementation of BioBERT☆340Updated 2 years ago
- Bioformer: an efficient BERT model for biomedical text mining☆55Updated 2 years ago