ncbi / bert_gt
☆32Updated last year
Alternatives and similar repositories for bert_gt
Users that are interested in bert_gt are comparing it to the libraries listed below
Sorting:
- ☆24Updated last year
- Bio relation extraction labeled dataset☆45Updated 3 years ago
- MIL-RBERT: A Data-driven Approach for Noise Reduction in Distantly Supervised Biomedical Relation Extraction (BioNLP @ ACL 2020)☆19Updated last year
- Benchmarking for Biomedical Natural Language Processing Tasks with a Domain Specific ALBERT☆29Updated 3 years ago
- Improving Biomedical Pretrained Language Models with Knowledge [BioNLP 2021]☆65Updated 2 years ago
- ☆35Updated 4 years ago
- BiOnt: Deep Learning using Multiple Biomedical Ontologies for Relation Extraction☆26Updated last year
- Bioformer: an efficient BERT model for biomedical text mining☆54Updated 2 years ago
- Repository for student projects within biomedical text mining from Lund University☆54Updated last year
- Generative Biomedical Entity Linking via Knowledge Base-Guided Pre-training and Synonyms-Aware Fine-tuning [NAACL 2022]☆19Updated 2 years ago
- Repository used to collect biomedical corpus on the Internet!☆35Updated 4 years ago
- [NAACL'21 & ACL'21] SapBERT: Self-alignment pretraining for BERT & XL-BEL: Cross-Lingual Biomedical Entity Linking.☆188Updated 2 years ago
- Codes for the EMNLP'2020 paper "Predicting Clinical Trial Results by Implicit Evidence Integration".☆14Updated 4 years ago
- A Keras implementation of the AAAI21 paper "a lightweight neural model for biomedical entity linking"☆53Updated 2 years ago
- The corresponding code for our paper: A sequence-to-sequence approach for document-level relation extraction.☆63Updated 11 months ago
- A collection of annotated biomedical corpora, which can be used for training supervised machine learning methods for various tasks in bio…☆36Updated 6 years ago
- Named Entity Recognition for biomedical entities☆47Updated 2 years ago
- Biomedical Entity Linking Benchmark☆13Updated 5 months ago
- DeepEventMine: End-to-end Neural Nested Event Extraction from Biomedical Texts☆95Updated 2 years ago
- BioELMo is a biomedical version of embeddings from language model (ELMo), pre-trained on PubMed abstracts.☆33Updated 5 years ago
- SciFive: a text-text transformer model for biomedical literature☆94Updated 11 months ago
- Distantly Supervised Biomedical Named Entity Recognition with Dictionary Expansion: https://ieeexplore.ieee.org/document/8983212☆12Updated 4 years ago
- We evaluate many models used for biomedical and clinical nlp tasks, and train new models that perform much better.☆160Updated 3 years ago
- BioCreative-V CDR Corpus☆27Updated 6 years ago
- ACL'2020: Biomedical Entity Representations with Synonym Marginalization☆167Updated last year
- Cross-type Biomedical Named Entity Recognition with Deep Multi-task Learning (Bioinformatics'19)☆135Updated 9 months ago
- Fast and Effective Biomedical Entity Linking Using a Dual Encoder☆19Updated 3 years ago
- A clinical BERT-based NLP tool for parsing clinical trial abstracts following the PICO framework☆45Updated 4 years ago