gchure / reproducible_research

Related projects ⓘ

Alternatives and complementary repositories for reproducible_research

• quantixed / manuscript-templates
  LaTeX templates for manuscripts. bioRxiv preprint and journal submission templates. For use on Overleaf.
  ☆69Updated 5 months ago
• ElisabethRoesch / Perspective_Julia_for_Biologists
  Online material for the Perspective: "Julia for Biologists" presented at JuliaCon 2021: https://www.youtube.com/watch?v=gRj7E5kYG1I
  ☆96Updated 2 years ago
• jdblischak / smk-simple-slurm
  A simple Snakemake profile for Slurm without --cluster-config
  ☆141Updated 4 months ago
• Emergent-Behaviors-in-Biology / community-simulator
  Simulate microbial community batch culture experiments.
  ☆42Updated last week
• deto / Snakemake_Tutorial
  A short tutorial on getting started with Snakemake for workflow management
  ☆48Updated 5 years ago
• gchure / reproducible_website
  A template website for presenting your reproducible website
  ☆14Updated last year
• johnbarton / ACE
  Fast and flexible code for solving the inverse Ising/Potts inference problem
  ☆26Updated last year
• fayjustin / computational_biology
  course material
  ☆122Updated last year
• crazyhottommy / The-world-of-faculty
  resources for faculty
  ☆208Updated last year
• snakemake-workflows / snakemake-workflow-template
  A template for standard compliant snakemake-workflows
  ☆89Updated last year
• finkelsteinlab / BioRxiv-Template
  MS Word templates for a more readable BioRxiv product
  ☆23Updated 6 years ago
• roylelab / manuscript-templates
  LaTeX templates for manuscripts. bioRxiv preprint and journal submission templates. For use on Overleaf.
  ☆20Updated 5 months ago
• asntech / postdoc-funding-schemes
  Funding schemes and travel grant opportunities for postdocs
  ☆50Updated 5 years ago
• popgenmethods / lecture_notes
  Lecture Notes on Computational and Mathematical Population Genetics
  ☆185Updated 3 years ago
• dougollerenshaw / figrid
  Utilities for formatting matplotlib figures
  ☆27Updated 2 years ago
• ybrandvain / GRFP
  Here are a set of example Relevant Background and Future Goals and Graduate Research Plan Statement statements for the NSF GRFP in Ecolog…
  ☆68Updated 6 years ago
• BioJulia / BioAlignments.jl
  Sequence alignment tools
  ☆60Updated 3 months ago
• Snakemake-Profiles / slurm
  Cookiecutter for snakemake slurm profile
  ☆126Updated 6 months ago
• schlegelp / bioRxiv-LaTeX-template
  LaTeX template to create a compiled PDF (text+figures) e.g. for bioRxiv.org
  ☆21Updated 8 years ago
• fraser-lab / fraser-lab.github.io
  Fraser Lab website
  ☆36Updated last week
• broadinstitute / pyro-cov
  Pyro models of SARS-CoV-2 variants
  ☆77Updated 3 months ago
• snakemake / snakefmt
  The uncompromising Snakemake code formatter
  ☆153Updated 4 months ago
• olgabot / awesome-expectations
  Examples of great academic lab expectations, manuals, policies for joining and being in the lab
  ☆50Updated 5 years ago
• BIMSBbioinfo / compgen2021
  ☆73Updated 3 years ago
• hoffmangroup / pdfcomments
  ☆128Updated last year
• mmkim1210 / GeneticsMakie.jl
  🧬High-performance genetics- and genomics-related data visualization using Makie.jl
  ☆82Updated 4 months ago
• greenelab / covid19-review
  A collaborative review of the emerging COVID-19 literature. Join the chat here:
  ☆116Updated 9 months ago
• GuyTeichman / RNAlysis
  Analyze your RNA sequencing data without writing a single line of code
  ☆129Updated last month
• BioJulia / BioSequences.jl
  Biological sequences for the julia language
  ☆152Updated 2 weeks ago
• StochSS / GillesPy2
  Modeling toolkit for biochemical simulation
  ☆72Updated last month