A template repository for how I structure my scientific research
☆119May 8, 2024Updated 2 years ago
Alternatives and similar repositories for reproducible_research
Users that are interested in reproducible_research are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- A template website for presenting your reproducible website☆16Apr 12, 2023Updated 3 years ago
- Utilities for BE/Bi 103☆16Sep 28, 2026Updated last month
- ☆11Apr 26, 2021Updated 5 years ago
- This project is a collection of tools for bioinformatic processing of ancient DNA data at the Harvard Medical School Reich Lab.☆29Aug 21, 2026Updated 2 months ago
- Adaptive resampling for machine learning in single-cell biology☆14Sep 30, 2026Updated last month
- Proton VPN Special Offer - Get 70% off • AdSpecial partner offer. Trusted by over 100 million users worldwide. Tested, Approved and Recommended by Experts.
- Julia package with several functions to train and analyze Autoencoder-based neural networks☆25Mar 27, 2025Updated last year
- Course in population genomics at BiRC☆12Mar 18, 2026Updated 7 months ago
- A completely automated MATLAB-based trainable image cell segmentation, fluorescence quantification and analysis suite, particularly well …☆33Dec 1, 2020Updated 5 years ago
- Epidemiological modeling framework for pathogen population genetics and evolution.☆19Oct 7, 2024Updated 2 years ago
- ☆10Apr 22, 2022Updated 4 years ago
- NGSeminar on the use of Jupyter and R notebooks in biomedical research☆13Jan 28, 2023Updated 3 years ago
- Development and build tools for Artix☆12Jul 2, 2018Updated 8 years ago
- ☆29Oct 22, 2025Updated last year
- Repository for GreeningLab metabolic marker gene databases☆14May 28, 2026Updated 5 months ago
- Open source password manager - Proton Pass • AdSecurely store, share, and autofill your credentials with Proton Pass, the end-to-end encrypted password manager trusted by millions.
- A python package for information-theoretic analysis of discrete and continuous data.☆34Aug 7, 2026Updated 2 months ago
- Get a nicely-chunked local copy of the biomedical literature (to use for other projects)!☆15Oct 5, 2026Updated 3 weeks ago
- Materials and presentation for the 2023 ISB Microbiome course.☆25Sep 25, 2024Updated 2 years ago
- ☆10Apr 30, 2019Updated 7 years ago
- Napari training material for a workshop by the CZI funded initiatives LIBRE hub, Napari, and several amazing volunteers☆10Sep 28, 2023Updated 3 years ago
- A presentation on using Emacs Org-mode for reproducible research, along with examples.☆18Dec 2, 2020Updated 5 years ago
- (DEPRECATED) epic: diffuse domain ChIP-Seq caller based on SICER☆31Nov 21, 2018Updated 7 years ago
- This repository implements Gibbs sampling with Graph-based Smoothing☆42May 29, 2024Updated 2 years ago
- How Post-Training Shapes Biological Reasoning Models☆17Jun 16, 2026Updated 4 months ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- Data-Driven Constraint-based analysis☆12Nov 4, 2022Updated 3 years ago
- Standardise TR/MH/IG data☆14Oct 19, 2026Updated last week
- Viernes de Bioinformatica en el LIIGH, 2 febrero - 2 de agosto 2024☆28Oct 24, 2025Updated last year
- Evolve new colour palettes☆15Feb 21, 2021Updated 5 years ago
- Hands-free microbial genome assembly☆11Jul 11, 2018Updated 8 years ago
- ☆12May 16, 2023Updated 3 years ago
- Code for fuzzy monkeys.☆15Sep 22, 2026Updated last month
- Tool for exploring sequence alignment algorithms☆14Aug 30, 2024Updated 2 years ago
- Resources for grounding protein families and complexes from text and describing their hierarchical relationships.☆18Mar 26, 2026Updated 7 months ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- ☆11Jul 28, 2022Updated 4 years ago
- ChiBio primary operating system.☆27Feb 10, 2026Updated 8 months ago
- Qualitative data analysis using org-mode☆31Sep 7, 2026Updated last month
- ☆12Aug 16, 2016Updated 10 years ago
- A Python API for estimating statistical high-order epistasis in genotype-phenotype maps.☆39Aug 18, 2023Updated 3 years ago
- Talk on reproducible research☆13Apr 27, 2026Updated 6 months ago
- Metataxonomics with 16S-23S rRNA operon☆12May 13, 2026Updated 5 months ago