Alternatives and similar repositories for GenoCraft

Users that are interested in GenoCraft are comparing it to the libraries listed below

• mims-harvard / Madrigal
  Madrigal: Multimodal AI predicts clinical outcomes of drug combinations from preclinical data
  ☆39Updated 6 months ago
• BiomedSciAI / Geno4SD
  An python omics data toolkit for the analysis across biological scales
  ☆11Updated 2 years ago
• HakimBenkirane / CustOmics
  A deep-learning framework for multi-omics integration
  ☆32Updated 2 years ago
• tavanaei / Cancer-Suppressor-Gene-Deep-Learning
  Cancer Suppressor Gene and Oncogene Prediction using Deep Learning (CNN)
  ☆10Updated 7 years ago
• ML2Health / ML2ClinicalTrials
  ☆40Updated 6 months ago
• ruiyi-zhang / scPretrain
  scPretrain: Multi-task self-supervised learning for cell type classification
  ☆23Updated 4 years ago
• bozdaglab / SUPREME
  SUPREME: A GCN based approach for cancer subtype prediction
  ☆18Updated 2 years ago
• insilicomedicine / precious3-gpt
  Wrappers for easier generative biology workflows
  ☆17Updated 4 months ago
• m42-health / biofm-eval
  Library to extract embeddings for DNA sequences using BioFM genomics foundation model
  ☆19Updated 6 months ago
• FunctionLab / tapioca
  a framework for predicting global protein-protein interaction networks from dynamic mass spec data
  ☆24Updated last year
• YihePang / IDP-LM
  Computational predictor of protein intrinsic disorder and its functions
  ☆10Updated 2 years ago
• WLYLab / ToxIBTL
  Code for paper "ToxIBTL: prediction of peptide toxicity based on information bottleneck and transfer learning"
  ☆13Updated 4 years ago
• lmsac / DeepGP
  ☆10Updated last year
• mims-harvard / SPECTRA
  SPECTRA: Spectral framework for evaluation of biomedical AI models
  ☆41Updated 11 months ago
• sinc-lab / miRe2e
  ☆14Updated 2 years ago
• ShenLab / gMVP
  ☆21Updated 3 years ago
• instadeepai / multiomics-open-research
  BulkRNABert and MOJO
  ☆32Updated 7 months ago
• openlifescience-ai / Awesome-Genomic-LLMs
  A curated list of awesome resources, papers, datasets, and tools related to Genomic LLMs. This repository aims to provide a comprehensive…
  ☆16Updated last year
• bowang-lab / genomic-FM
  ☆33Updated this week
• baranwa2 / MetabolicPathwayPrediction
  ☆38Updated 2 years ago
• valence-labs / Tx-Evaluation
  Bencharking pipeline for evaluating Transcriptomic representations for perturbation tasks
  ☆12Updated last year
• zuozhaorui / SWnet
  Core code for the paper "A deep learning model for drug response prediction from cancer genomic signatures and compound chemical structur…
  ☆22Updated 4 years ago
• aedera / anc2vec
  Unsupervised neural network for learning embeddings of GO terms.
  ☆20Updated 3 years ago
• yuzhenmao / ScRAT
  Implementation of Phenotype prediction from single-cell RNA-seq data using attention-based neural networks (Bioinformatics 2024).
  ☆13Updated last year
• dmis-lab / moable
  Predicting mechanism of action of novelcompounds using compound structure andtranscriptomic signature co-embedding
  ☆14Updated 2 years ago
• HanwenXuTHU / BioTranslatorProject
  ☆35Updated 2 years ago
• alrojo / UniLanguage
  Homology reduced UniProt, train-/valid-/testsets for language modeling
  ☆16Updated 3 years ago
• LincolnSteinLab / oncoGAN
  A pipeline that accurately simulates high quality publicly cancer genomes (VCFs, CNAs and SVs).
  ☆35Updated last week
• KatarinaYuan / awesome-single-cell-foundation
  Paper collection for single cell foundation models
  ☆36Updated last year
• haichengyi / ACP-DL
  A deep learning model to predict anticancer peptides.
  ☆24Updated 6 years ago