siboles / pyCellAnalystLinks
pyCellAnalyst is a Python module for 3D reconstruction and deformation analysis of biological objects.
☆10Updated 3 years ago
Alternatives and similar repositories for pyCellAnalyst
Users that are interested in pyCellAnalyst are comparing it to the libraries listed below
Sorting:
- A collection of tools for manipulation of morphological features in patient-specific geometries☆33Updated 10 months ago
- A C++ solver for blood flow and pressure in deformable 1D hemodynamic networks☆18Updated 5 months ago
- Simple programs used with the SimVascular application suite.☆11Updated 2 years ago
- Create volumetric mesh from segmentation using Cleaver2 or TetGen☆31Updated last year
- Manupulate VTK files in Python☆77Updated 9 months ago
- A comprehensive opensource software package providing a complete pipeline from medical image data segmentation to patient specific blood …☆274Updated this week
- Interfacing AI with numerical simulation.☆45Updated 3 months ago
- A collection of tools for pre-processing, simulating, and post-processing vascular morphologies.☆17Updated 4 months ago
- Code and data in support of publication on Cardiac PINN☆22Updated 4 years ago
- Solver for simulating tumor growth and mass effect in patient brain anatomy☆27Updated 7 months ago
- Wall shear stress (WSS) calculation for 4D Flow MRI☆30Updated last year
- Iso2Mesh - a 3D surface and volumetric mesh generator for MATLAB/Octave☆195Updated last week
- A MEX interface to the VTK library. It provides MATLAB functions to read and write VTK files and to apply VTK filters to datasets.☆24Updated 3 months ago
- A software for assigning myocardial fiber orientations based on the Laplace Dirichlet Ruled-Based algorithm☆22Updated this week
- Computed Tomography to Finite Elements☆22Updated 2 weeks ago
- A multi-physics finite element solver for patient-specific blood flow simulation including fluid-structure interaction and cardiac electr…☆42Updated last year
- ☆61Updated 2 years ago
- Turn STL files into voxels, images, and videos☆160Updated last month
- Lecture series on From magnetic resonance imaging to finite element simulation☆18Updated 2 years ago
- MITK - Generate Models (MITK-GEM) is a free open-source software pipeline to generate finite element models from image data.☆39Updated 4 years ago
- swc to vtk converter for visualization of neuron and neural circuit simulation in ParaView☆12Updated 7 years ago
- biv-me is a repository for creating personalised 3D+t biventricular meshes from cardiac magnetic resonance imaging. Developed and maintai…☆20Updated last week
- A software for solving problems in cardiac mechanics☆16Updated this week
- Fast Iterative Digital Volume Correlation Algorithm☆35Updated 2 years ago
- Whole-heart electromechanical simulations using Latent Neural Ordinary Differential Equations☆9Updated 8 months ago
- When using, please cite "A new family of Constitutive Artificial Neural Networks towards automated model discovery", CMAME, https://doi.o…☆52Updated 3 weeks ago
- A Python lumped-parameter solver for blood flow and pressure in hemodynamic networks☆13Updated last year
- Selected notebooks on non-linear continuum mechanics☆15Updated 2 months ago
- Bring the capabilities of 3D Slicer to the web with modern UI using the trame framework!☆12Updated this week
- 3D Slicer extension which contains a Segment Editor Effect that solidifies and extracts the surface of a segmentation☆33Updated last year