pyCellAnalyst is a Python module for 3D reconstruction and deformation analysis of biological objects.
☆10Nov 10, 2021Updated 4 years ago
Alternatives and similar repositories for pyCellAnalyst
Users that are interested in pyCellAnalyst are comparing it to the libraries listed below
Sorting:
- Benchmarking physics-constrained data-driven models of hyperelasticity against rubber and soft tissue datasets☆16Jan 15, 2023Updated 3 years ago
- Python programming workshop for bioinformatics☆10Jul 13, 2021Updated 4 years ago
- ExaDEM is a HPC software solution in the field of computational simulations. ExaDEM is built on top of exaNBody platform.☆17Updated this week
- PIVPy helps to understand PIV results, inspired by PIVMAT☆14Jan 9, 2026Updated 2 months ago
- Portable python bindings for OpenSim with comprehensive type hints.☆20Oct 23, 2025Updated 4 months ago
- GPU-accelerated pipeline for robust 3D mesh Boolean operations (CSG) using voxelized Signed Distance Fields (SDFs).☆25Sep 18, 2025Updated 6 months ago
- A set of metabolomics tools for use in Galaxy☆11Sep 2, 2022Updated 3 years ago
- Comsol model files and python scripts used for my PhD in 2020☆13Mar 2, 2020Updated 6 years ago
- The database and API backend for ZincBind - the database of zinc binding sites☆16Apr 8, 2025Updated 11 months ago
- ☆21Aug 14, 2025Updated 7 months ago
- Micro mechanical computations with an FFT-based method☆57Nov 15, 2021Updated 4 years ago
- 2D Navier-Stokes solver for the square cavity flow using a spectral collocation method☆11May 5, 2019Updated 6 years ago
- ☆33Oct 12, 2020Updated 5 years ago
- FiberApp is a software for tracking and analyzing biomacromolecules, polymers, filaments and fibrous objects☆13Jan 7, 2019Updated 7 years ago
- A meso-scale lattice simulation engine, including geometry creation, meshing, and homogenization-based finite element simulation.☆17Dec 9, 2025Updated 3 months ago
- 3D Traction Force Microscopy with Python. Calculate cell-generated forces in collagen or other (nonlinear) biopolymer networks.☆16Jul 28, 2025Updated 7 months ago
- A libary of mechanical material models for finite element simulations.☆14Jan 23, 2025Updated last year
- THe legacy HYPLAS code with multiscale modelling capabilities☆13Jun 13, 2019Updated 6 years ago
- A simple MATLAB code to show an optimized implementation of the Virtual Element Method for the Poisson equation.☆11Sep 24, 2020Updated 5 years ago
- Fast, matrix-free isogeometric Galerkin method for Karhunen-Loeve approximation of random fields.☆11Mar 22, 2021Updated 5 years ago
- Machine learning with emphasis on Deep Learning hands-on class.☆18Oct 25, 2018Updated 7 years ago
- Isogeometric analysis based topology optimization☆11Oct 4, 2021Updated 4 years ago
- This is an OOD framework in Matlab, designed for development of CAGD (Computer Aided Geometric Design) applications. Currently it include…☆11Oct 30, 2019Updated 6 years ago
- XDSME: XDS Made Easier☆13Jan 5, 2023Updated 3 years ago
- The mechanoChemIGA code is an isogeometric analysis based code used to solve the partial differential equations describing solid mechanic…☆14Oct 15, 2020Updated 5 years ago
- ☆35Mar 10, 2026Updated last week
- A Simple Lattice Infiller☆21Feb 23, 2026Updated 3 weeks ago
- Fork of Chris Hafey's cornerstoneWADOImageLoader to load DICOM images from zipped DICOMDIR archives☆11May 3, 2022Updated 3 years ago
- CoreformIGA contains a number of simple routines to perform spline-based and isogeometric analysis. The purpose of the package is to fost…☆10Feb 3, 2021Updated 5 years ago
- 2 dimensional particle image velocimetry, traction force microscopy and monolayer stress microscopy☆25Dec 19, 2023Updated 2 years ago
- generative neural network trained with physics knowledge☆14Mar 8, 2021Updated 5 years ago
- Custom implementation based on Bonet and Wood's Nonlinear FEM book http://www.flagshyp.com☆15Mar 6, 2026Updated 2 weeks ago
- Python code for solving 3D structural problems with uncertainties using the finite element method☆12Jul 12, 2025Updated 8 months ago
- AMI Viewer Polymer element☆11Dec 15, 2016Updated 9 years ago
- ☆13Updated this week
- Fast computation of soft tissue thermal response under deformation based on fast explicit dynamics finite element algorithm for surgical …☆10May 30, 2022Updated 3 years ago
- ☆13Jun 2, 2016Updated 9 years ago
- ☆10Mar 17, 2015Updated 11 years ago
- Deep learning on 3d meshes via model simplification☆13Aug 14, 2018Updated 7 years ago