siboles / pyCellAnalystLinks
pyCellAnalyst is a Python module for 3D reconstruction and deformation analysis of biological objects.
☆10Updated 4 years ago
Alternatives and similar repositories for pyCellAnalyst
Users that are interested in pyCellAnalyst are comparing it to the libraries listed below
Sorting:
- A collection of tools for manipulation of morphological features in patient-specific geometries☆33Updated last year
- Create volumetric mesh from segmentation using Cleaver2 or TetGen☆33Updated last year
- Manupulate VTK files in Python☆79Updated last year
- swc to vtk converter for visualization of neuron and neural circuit simulation in ParaView☆12Updated 8 years ago
- Interfacing AI with numerical simulation.☆44Updated 9 months ago
- Automated segmentation tool for the extraction of individual fibers in short fiber reinforced composites☆16Updated 2 years ago
- Computed Tomography to Finite Elements☆23Updated 3 weeks ago
- Iso2Mesh - a 3D surface and volumetric mesh generator for MATLAB/Octave☆207Updated 2 months ago
- A C++ solver for blood flow and pressure in deformable 1D hemodynamic networks☆20Updated 11 months ago
- An open-source, free comprehensive software that will allow biomedical scientists to precisely locate shape changes in their imaging stud…☆67Updated last month
- A software for assigning myocardial fiber orientations based on the Laplace Dirichlet Ruled-Based algorithm☆22Updated this week
- biv-me is a repository for creating personalised 3D+t biventricular meshes from cardiac magnetic resonance imaging. Developed and maintai…☆31Updated 3 months ago
- A MEX interface to the VTK library. It provides MATLAB functions to read and write VTK files and to apply VTK filters to datasets.☆28Updated 9 months ago
- Simple programs used with the SimVascular application suite.☆12Updated 3 years ago
- A comprehensive opensource software package providing a complete pipeline from medical image data segmentation to patient specific blood …☆295Updated this week
- Selected notebooks on non-linear continuum mechanics☆16Updated 8 months ago
- MITK - Generate Models (MITK-GEM) is a free open-source software pipeline to generate finite element models from image data.☆42Updated 5 years ago
- Assign material properties of bone to a finite element mesh☆13Updated 2 years ago
- Implementation of the 1D blood flow equations using FEniCS☆22Updated 6 years ago
- An ABAQUS plug-in to map bone properties from CT scans to 3D finite element bone/implant models☆36Updated last year
- ☆95Updated this week
- A software for solving problems in cardiac mechanics☆17Updated 2 weeks ago
- Turn STL files into voxels, images, and videos☆170Updated 7 months ago
- Curvature and Laplace-Beltrami estimation on triangulated surface meshes☆20Updated 6 years ago
- Wall shear stress (WSS) calculation for 4D Flow MRI☆33Updated last year
- The Geometry and Image-Based Bioengineering add-On for MATLAB☆209Updated last year
- Stent simulation software☆11Updated 7 years ago
- FEBio Suite Solver☆244Updated this week
- ☆52Updated 7 months ago
- Python workflow tool for generating meshes from 2D and 3D image data☆45Updated last year