ClementiGroup / LSDMap-DM-d-MDLinks
Locally-Scaled Diffusion Maps, DM-d-MD
☆12Updated 9 years ago
Alternatives and similar repositories for LSDMap-DM-d-MD
Users that are interested in LSDMap-DM-d-MD are comparing it to the libraries listed below
Sorting:
- Model Evaluation Toolkit☆27Updated 6 years ago
- ☆15Updated 6 months ago
- Normal Mode Analysis for Macromolecules☆17Updated 8 years ago
- Reinforcement learning environments for drug discovery☆18Updated last year
- Challenge inputs, details, and results for the SAMPL6 series of challenges☆54Updated 3 years ago
- Automated omics-scale protein modeling and simulation setup.☆53Updated 4 years ago
- Get access to our MD data files.☆29Updated 2 years ago
- Modeling Tanimoto distributions for RDKit☆18Updated 5 years ago
- MaxEnt code for fitting simulation outcomes/statistical models to observations☆16Updated 3 years ago
- open toolbox for structural comparison☆13Updated 7 years ago
- How to analyze molecular dynamics data with PyEMMA☆81Updated 6 years ago
- Bayesian inference of conformational populations☆13Updated 6 months ago
- Challenge details, inputs, and results for the SAMPL7 series of challenges☆48Updated 4 years ago
- MDToolbox: A MATLAB/Octave toolbox for statistical analysis of molecular dynamics trajectories☆26Updated 6 years ago
- Data and scripts for comprehensive benchmark of conformer relative energies☆25Updated 5 years ago
- Population-based De Novo Molecule Generation, Using Grammatical Evolution☆40Updated 4 years ago
- ☆14Updated 3 years ago
- An efficient method for the conversion from internal to Cartesian coordinates that utilizes the platform-agnostic JAX Python library.☆18Updated last year
- Best Practices article intended for LiveCoMS☆42Updated 6 years ago
- This is an updated version of the MolecularTransformer of Schwaller et. al.☆14Updated 3 years ago
- OpenMM plugin to interface with XTB☆19Updated last month
- qFit: Automated and unbiased multi-conformer models from X-ray and EM maps.☆45Updated last week
- Applications of nonequilibrium candidate Monte Carlo (NCMC) to ligand binding mode sampling☆34Updated last month
- Using Gomacs from IPython notebook☆20Updated 11 years ago
- A command line application to launch molecular dynamics simulations with OpenMM☆40Updated 3 years ago
- Enhancing Early Detection of Drug-Induced Liver Injury Through Predicted in vivo and in vitro Data Integration☆20Updated 4 months ago
- An implementation of Delaney's ESOL method using the RDKit☆62Updated 7 years ago
- A primer on statistical mechanics for biochemists☆48Updated 3 years ago
- Examples and data for performing path similarity analysis (PSA).☆17Updated 10 years ago
- Generate canonical molecule identifiers for quantum chemistry database☆23Updated 4 years ago