ClementiGroup / LSDMap-DM-d-MDLinks
Locally-Scaled Diffusion Maps, DM-d-MD
☆12Updated 9 years ago
Alternatives and similar repositories for LSDMap-DM-d-MD
Users that are interested in LSDMap-DM-d-MD are comparing it to the libraries listed below
Sorting:
- Encoding of transition probabilities with undirected graphical models☆9Updated 6 years ago
- Model Evaluation Toolkit☆27Updated 6 years ago
- Reinforcement learning environments for drug discovery☆18Updated 10 months ago
- Using Gomacs from IPython notebook☆19Updated 11 years ago
- ☆13Updated 3 weeks ago
- open toolbox for structural comparison☆13Updated 6 years ago
- Normal Mode Analysis for Macromolecules☆18Updated 8 years ago
- How to analyze molecular dynamics data with PyEMMA☆76Updated 6 years ago
- Automated omics-scale protein modeling and simulation setup.☆53Updated 3 years ago
- The pytram package is deprecated and no longer supported. We recommend to switch to PyEMMA☆9Updated 9 years ago
- A Deep Learning based protein flexibility prediction tool.☆9Updated 2 years ago
- Build conformational representations of Intrinsically Disordered Proteins and Regions by a guided sampling of the protein torsion space☆23Updated this week
- Best Practices article intended for LiveCoMS☆41Updated 5 years ago
- Get access to our MD data files.☆29Updated last year
- Challenge inputs, details, and results for the SAMPL6 series of challenges☆54Updated 3 years ago
- Modeling molecular ensembles with scalable data structures and parallel computing☆36Updated last week
- Population-based De Novo Molecule Generation, Using Grammatical Evolution☆41Updated 4 years ago
- This is an updated version of the MolecularTransformer of Schwaller et. al.☆13Updated 3 years ago
- MDToolbox: A MATLAB/Octave toolbox for statistical analysis of molecular dynamics trajectories☆25Updated 5 years ago
- Alchemical tools for OpenMM☆9Updated 3 years ago
- Software package for FEP☆18Updated 11 months ago
- Enhancing Early Detection of Drug-Induced Liver Injury Through Predicted in vivo and in vitro Data Integration☆12Updated last year
- Challenge details, inputs, and results for the SAMPL7 series of challenges☆47Updated 3 years ago
- Chemical perception tree automated exploration tool.☆19Updated 6 years ago
- Graph Inference on MoLEcular Topology☆26Updated 2 years ago
- Best practice document for alchemical free energy calculations going to livecoms journal☆74Updated this week
- Data and scripts for comprehensive benchmark of conformer relative energies☆25Updated 5 years ago
- Repository for Chemical Perception Sampling Tools☆21Updated 11 months ago
- Python package for generating Markov state models☆17Updated 2 years ago
- A primer on statistical mechanics for biochemists☆46Updated 2 years ago