Readings for "A Unified View of Relational Deep Learning for Drug Pair Scoring." (IJCAI 2022)
☆98Aug 7, 2022Updated 3 years ago
Alternatives and similar repositories for awesome-drug-pair-scoring
Users that are interested in awesome-drug-pair-scoring are comparing it to the libraries listed below
Sorting:
- Code to accompany the "Implications of Topological Imbalance for Representation Learning on Biomedical Knowledge Graphs" (Briefings in B…☆19Feb 11, 2026Updated 3 weeks ago
- A PyTorch and TorchDrug based deep learning library for drug pair scoring. (KDD 2022)☆771Sep 11, 2023Updated 2 years ago
- Using PubMed to find out how a gene contributes to addiction.☆20Dec 27, 2022Updated 3 years ago
- Machine learning framework for predicting the responses of drug combinations in pre-clinical studies, such as those based on cell lines o…☆26Oct 25, 2020Updated 5 years ago
- learning biology syllabus, geared for machine learning folks☆136Dec 5, 2022Updated 3 years ago
- TigerLily: Finding drug interactions in silico with the Graph.☆100Dec 17, 2022Updated 3 years ago
- Efficiently calculate 3D-features for quantitative structure-activity relationship approaches.☆72Feb 1, 2024Updated 2 years ago
- Biobb_amber is a BioBB category for AMBER MD package.☆14Dec 22, 2025Updated 2 months ago
- Inpainting protein sequence and structure☆12Nov 10, 2023Updated 2 years ago
- Intuitive graphical representation of source code☆14Mar 15, 2023Updated 2 years ago
- A Deep Learning Toolkit for DTI, Drug Property, PPI, DDI, Protein Function Prediction (Bioinformatics)☆1,133Jun 10, 2024Updated last year
- A collection of research papers and software related to explainability in graph machine learning.☆1,985Apr 4, 2022Updated 3 years ago
- A general purpose recommender metrics library for fair evaluation.☆276Aug 22, 2023Updated 2 years ago
- TIP: Tri-graph Interaction Propagation model for Polypharmacy Side Effect Prediction (GRL@NeurIPS, 2019)☆25Dec 2, 2022Updated 3 years ago
- Protein Graph Library☆1,163Mar 2, 2026Updated last week
- Therapeutics Commons (TDC): Multimodal Foundation for Therapeutic Science☆1,210Jul 13, 2025Updated 7 months ago
- A CNN - based pipeline for calling somatic SNP and INDEL variants without a matched normal☆11Sep 7, 2022Updated 3 years ago
- ant design pro service,mock,model generator☆12Dec 11, 2022Updated 3 years ago
- ☆10Dec 19, 2022Updated 3 years ago
- Cross-domain data integration for named entity disambiguation in biomedical text☆11Dec 15, 2021Updated 4 years ago
- ☆13Aug 29, 2020Updated 5 years ago
- ☆13Aug 13, 2020Updated 5 years ago
- A high throughput automated drug discovery pipeline.☆29Mar 16, 2018Updated 7 years ago
- [Bioinformatics 2021] This is the repo for the paper `SumGNN: Multi-typed Drug Interaction Prediction via Efficient Knowledge Graph Summa…☆90Jul 25, 2024Updated last year
- ☆12Jan 29, 2022Updated 4 years ago
- SPLICE-q -- A Python tool for genome-wide SPLIcing Efficiency quantification from RNA-seq data.☆12Sep 15, 2023Updated 2 years ago
- Fast graph classifier with optical random features☆12Mar 2, 2021Updated 5 years ago
- This repository contains code for reproducing results in our paper Interpreting Potts and Transformer Protein Models Through the Lens of …☆58Sep 30, 2022Updated 3 years ago
- This repo contains a reference implementation for the paper "Breaking the Limit of Graph Neural Networks by Improving the Assortativity o…☆32Dec 2, 2021Updated 4 years ago
- D-CODE: Discovering Closed-form ODEs from Observed Trajectories☆15Feb 25, 2022Updated 4 years ago
- Shows some of the ways molecule generation and optimization can go wrong☆17Jul 6, 2023Updated 2 years ago
- ☆16Apr 2, 2023Updated 2 years ago
- A simple Python 2.7 module for computing local and relative simplicial homology☆14Nov 21, 2023Updated 2 years ago
- A powerful and flexible machine learning platform for drug discovery☆1,567Aug 12, 2024Updated last year
- A fork of Sebastian Nowozin's and Koji Tsuda's gboost code☆17Mar 5, 2013Updated 13 years ago
- Drug Discovery under Covariate Shift with Domain-Informed Prior Distributions over Functions☆24Jul 13, 2023Updated 2 years ago
- ScaffoldGraph is an open-source cheminformatics library, built using RDKit and NetworkX, for the generation and analysis of scaffold netw…☆196Jan 27, 2022Updated 4 years ago
- Coloring molecules with explainable artificial intelligence☆16Feb 8, 2021Updated 5 years ago
- ☆19Oct 10, 2020Updated 5 years ago