Alternatives and similar repositories for mme-apis

Users that are interested in mme-apis are comparing it to the libraries listed below

• BD2KGenomics / toil-scripts
  Toil workflows for common genomic pipelines
  ☆33Updated 6 years ago
• googlegenomics / pipelines-api-examples
  Examples for the Google Genomics Pipelines API.
  ☆50Updated 7 years ago
• ga4gh / ga4gh-server
  Reference implementation of the APIs defined in ga4gh-schemas. RETIRED 2018-01-24
  ☆99Updated 7 years ago
• biothings / myvariant.info
  MyVariant.info: A BioThings API for human variant annotations
  ☆96Updated 2 months ago
• ewels / clusterflow
  A pipelining tool to automate and standardise bioinformatics analyses on cluster environments.
  ☆98Updated 2 years ago
• openvax / varcode
  Library for manipulating genomic variants and predicting their effects
  ☆85Updated last year
• konradjk / exac_browser
  Browser for ExAC consortium data
  ☆106Updated 3 years ago
• biocommons / biocommons.seqrepo
  non-redundant, compressed, journalled, file-based storage for biological sequences
  ☆47Updated last week
• macarthur-lab / clinvar
  This repo provides tools to convert ClinVar data into a tab-delimited flat file, and also provides that resulting tab-delimited flat file…
  ☆128Updated 5 years ago
• ga4gh-beacon / specification
  GA4GH Beacon specification.
  ☆32Updated 2 years ago
• biocommons / uta
  Universal Transcript Archive: comprehensive genome-transcript alignments; multiple transcript sources, versions, and alignment methods; a…
  ☆71Updated last month
• gogetdata / ggd-recipes
  conda recipes for genomic data
  ☆84Updated 4 years ago
• ohsu-comp-bio / g2p-aggregator
  Associations of genomic features, drugs and diseases
  ☆48Updated 2 years ago
• TheJacksonLaboratory / LIRICAL
  LIkelihood Ratio Interpretation of Clinical AbnormaLities
  ☆29Updated this week
• ga4gh / vrs-python
  GA4GH Variation Representation Python Implementation
  ☆60Updated this week
• biobuilds / biobuilds
  Curated collection of open-source bioinformatics tools
  ☆28Updated 6 years ago
• epiviz / epiviz
  EpiViz is a scientific information visualization tool for genetic and epigenetic data, used to aid in the exploration and understanding o…
  ☆71Updated 2 years ago
• ga4gh / htsget
  Python client for GA4GH htsget protocol
  ☆15Updated 3 years ago
• EBISPOT / goci
  GWAS Catalog Ontology and Curation Infrastructure
  ☆26Updated 3 weeks ago
• moonso / vcf_parser
  Simple vcf parser, based on PyVCF
  ☆47Updated 6 years ago
• HAShihab / fathmm-MKL
  Predict the functional consequences of both coding and non-coding single nucleotide variants (SNVs)
  ☆20Updated 4 years ago
• The-Sequence-Ontology / SO-Ontologies
  Collect of SO Ontologies
  ☆101Updated 2 months ago
• common-workflow-lab / wdl2cwl
  [Experimental] Workflow Definition Language (WDL) to CWL
  ☆28Updated 4 years ago
• nellore / rail
  Scalable RNA-seq analysis
  ☆73Updated 4 years ago
• iobio / bam.iobio.io
  http://bam.iobio.io
  ☆47Updated last year
• Clinical-Genomics / chanjo
  Chanjo provides a better way to analyze coverage data in clinical sequencing.
  ☆50Updated 11 months ago
• arq5x / cyvcf
  A fast Python library for VCF files leveraging Cython for speed.
  ☆52Updated 7 years ago
• ngsutils / ngsutils
  Tools for next-generation sequencing analysis
  ☆89Updated 6 years ago
• bcbio / bcbio-nextgen-vm
  Run bcbio-nextgen genomic sequencing analyses using isolated containers and virtual machines
  ☆67Updated 5 years ago
• bbglab / muts-needle-plot
  A needle plot for mutation data
  ☆27Updated 8 years ago