Alternatives and similar repositories for loco_hd

Users that are interested in loco_hd are comparing it to the libraries listed below

• ShintaroMinami / mican
  Non-sequential structural alignment program for protein structure
  ☆19Updated 8 months ago
• JudeWells / chainsaw
  ☆40Updated 9 months ago
• lightdock / lightdock-rust
  A Rust implementation of the LightDock macromolecular docking software
  ☆29Updated last year
• CongLabCode / DPAM
  A domain parser for Alphafold models
  ☆38Updated last year
• labstructbioinf / pLM-BLAST
  Detection of remote homology by comparison of protein language model representations
  ☆54Updated 6 months ago
• psipred / s4pred
  A tool for accurate prediction of a protein's secondary structure from only it's amino acid sequence
  ☆54Updated 2 months ago
• psipred / merizo_search
  Fast protein domain structure embedding+search tool
  ☆21Updated last month
• PDB-REDO / AlphaBridge
  ☆34Updated this week
• kWeissenow / EMBER3D
  Ultra-fast in-silico structure mutation
  ☆34Updated 2 months ago
• UCLOrengoGroup / cath-alphaflow
  ☆21Updated last month
• MIDIfactory / AlphaFastPPi
  Fast AlphaFold-Multimer based pipeline for Protein-Protein Interaction (PPI) screening
  ☆38Updated 9 months ago
• GodzikLab / FATCAT-dist
  ☆15Updated 2 years ago
• labstructbioinf / localpdb
  Python package to manage protein structures and their annotations
  ☆43Updated last year
• KULL-Centre / _2022_functional-sites-cagiada
  ☆22Updated last year
• steineggerlab / folddisco
  Fast indexing and search of discontinuous motifs in protein structures
  ☆23Updated this week
• psipred / ted-tools
  ML toolset for creating TED: The Encyclopedia of Domains
  ☆21Updated 3 weeks ago
• SNU-CSSB / RF2-Lite
  ☆30Updated last year
• kWeissenow / MutAmore
  Rendering protein mutation movies from predicted 3D structures
  ☆20Updated last year
• ewbell94 / PEPPI
  Pipeline for protein-protein interaction prediction
  ☆23Updated 3 years ago
• harmslab / topiary
  Python framework for doing ancestral sequence reconstruction
  ☆38Updated 11 months ago
• minmarg / gtalign_alpha
  GTalign, high-performance protein structure alignment, superposition and search
  ☆46Updated this week
• 3BioCompBio / pyScoMotif
  Python tool for the discovery of similar 3D structural motifs across protein structures.
  ☆27Updated last year
• swanss / FragFold
  Fragment binding prediction with ColabFold
  ☆35Updated 3 months ago
• esbgkannan / kibby
  A fast, alignment-free method for estimating sequence conservation using protein sequence embedding
  ☆16Updated 2 years ago
• jtrinquier / SoftAlign
  ☆23Updated last month
• kamerlinlab / cadee
  CADEE: Computer-Aided Directed Evolution of Enzymes
  ☆18Updated last year
• marrink-lab / martini-workshop
  Martini Workshop: Simulating a Minimal Bacterial Cell
  ☆12Updated last year
• althonos / mini3di
  A NumPy port of the foldseek code for encoding protein structures to 3di.
  ☆56Updated 3 months ago
• MannLabs / structuremap_analysis
  Analysis workflow for investigating the structural context of PTMs
  ☆11Updated last year
• ut-arailab / WSME-L_model
  ☆23Updated last year