Alternatives and similar repositories for drug_named_entity_recognition

Users that are interested in drug_named_entity_recognition are comparing it to the libraries listed below

• icd-codex / icd-codex
  python library for graphical and continuous representations of ICD9 and ICD10 codes
  ☆41Updated last week
• drivendataorg / snomed-ct-entity-linking
  Winners of the SNOMED CT Entity Linking Challenge
  ☆43Updated last year
• CogStack / MedCATtutorials
  General tutorials for the setup and use of MedCAT.
  ☆41Updated 7 months ago
• metapub / metapub
  Python toolkit for NCBI metadata (via eutils) and pubmed article text mining -- official primary repo.
  ☆140Updated 4 months ago
• MLD3 / FIDDLE
  FlexIble Data-Driven pipeLinE – a preprocessing pipeline that transforms structured EHR data into feature vectors to be used with ML algo…
  ☆98Updated 6 months ago
• CogStack / Foresight
  Deep Generative Modelling of Patient Timelines using Electronic Health Records
  ☆70Updated 6 months ago
• clinicalml / omop-learn
  Python package for machine learning for healthcare using a OMOP common data model
  ☆111Updated 2 years ago
• HPIMS / phe2vec
  Phe2vec: Automated Disease Phenotyping based on Unsupervised Embeddings from Electronic Health Records
  ☆24Updated 5 years ago
• Yale-LILY / Ascle
  A Python Natural Language Processing Toolkit for Medical Text Generation
  ☆84Updated 7 months ago
• StefanoTrv / simple_icd_10_CM
  A simple python library for ICD-10-CM codes
  ☆80Updated 4 months ago
• uf-hobi-informatics-lab / GatorTron
  all scripts used in gatortron project
  ☆130Updated 2 years ago
• Melbourne-BMDS / mimic34md2020_materials
  ☆23Updated 3 years ago
• AIM-Harvard / SDoH
  Large Language Models to Identify Social Determinants of Health in Electronic Health Records | Paper: https://www.nature.com/articles/s41…
  ☆48Updated 2 years ago
• kaneplusplus / icd-10-cm-embedding
  LLM Embeddings for ICD 10 Data
  ☆61Updated last year
• StefanoTrv / simple_icd_10
  A simple python library for ICD-10 codes
  ☆44Updated 6 months ago
• rcolinp / clinical_informatics_umls
  An exploratory, tutorial and analytical view of the Unified Medical Language System (UMLS) & the software/technologies provided via being…
  ☆48Updated last year
• tomolopolis / SNOMED-CT_Analysis
  Notebooks etc. Analysis of SNOMED-CT for the Clinical Coding Pilot and related work
  ☆14Updated 5 years ago
• StanfordMIMI / clin-summ
  Clinical text summarization by adapting large language models
  ☆155Updated last year
• AstraZeneca / KAZU
  Fast, world class biomedical NER
  ☆87Updated 10 months ago
• clinical-ai / omop-etl
  ETL Tool for converting datasets to OMOP CDM
  ☆35Updated 3 years ago
• drivendataorg / snomed-ct-entity-linking-runtime
  Runtime repository for the SNOMED CT Entity Linking challenge on DrivenData
  ☆14Updated last year
• VectorInstitute / cyclops
  A toolkit for evaluating and monitoring AI models in clinical settings
  ☆87Updated 2 weeks ago
• nyuolab / NYUTron
  public code repository for paper "Health system scale language models are general purpose clinical prediction engines"
  ☆121Updated 2 years ago
• cthoyt / umls_downloader
  Don't worry about UMLS, RxNorm, SNOMED, or SemMedDB licensing - write code that knows how to download it automatically
  ☆41Updated last year
• CogStack / MedCATtrainer
  A simple interface to inspect, improve and add concepts to biomedical NER+L -> MedCAT.
  ☆85Updated 4 months ago
• MIT-LCP / bloatectomy
  A python package for removing duplicate text in clinical notes or other documents
  ☆39Updated 5 years ago
• lisavirginia / clinical-abbreviations
  ☆66Updated 4 years ago
• deepmedicine / BEHRT
  Code for BEHRT: Transformer for Electronic Health Records
  ☆119Updated 2 years ago
• Aitslab / EasyNER
  a customzable pipeline for information extraction
  ☆18Updated 7 months ago
• MadhumitaSushil / OncLLMExtraction
  Expert-Curated Oncology Reports to Advance Language Model Inference
  ☆30Updated last year