StanfordMIMI / clin-summLinks
Clinical text summarization by adapting large language models
☆149Updated last year
Alternatives and similar repositories for clin-summ
Users that are interested in clin-summ are comparing it to the libraries listed below
Sorting:
- MedAlign is a clinician-generated dataset for instruction following with electronic medical records.☆95Updated 3 months ago
- Code for MedCPT, a model for zero-shot biomedical information retrieval.☆200Updated last year
- all scripts used in gatortron project☆122Updated last year
- Official Codes for "Publicly Shareable Clinical Large Language Model Built on Synthetic Clinical Notes"☆107Updated last year
- Expert-Curated Oncology Reports to Advance Language Model Inference☆29Updated last year
- A novel medical large language model family with 13/70B parameters, which have SOTA performances on various medical tasks☆158Updated 7 months ago
- PMC-Patients: A Large-scale Dataset of Patient Summaries and Relations for Benchmarking Retrieval-based Clinical Decision Support Systems…☆68Updated last year
- A benchmark for few-shot evaluation of foundation models for electronic health records (EHRs)☆185Updated 2 months ago
- ☆91Updated 6 months ago
- A Python Natural Language Processing Toolkit for Medical Text Generation☆82Updated 3 months ago
- For Med-Gemini, we relabeled the MedQA benchmark; this repo includes the annotations and analysis code.☆56Updated last year
- General tutorials for the setup and use of MedCAT.☆39Updated 3 months ago
- Code and data for MedQA☆295Updated 2 years ago
- PMC-Patients☆99Updated last year
- Curated papers on Large Language Models in Healthcare and Medical domain☆349Updated 2 months ago
- A large-scale (194k), Multiple-Choice Question Answering (MCQA) dataset designed to address realworld medical entrance exam questions.☆227Updated 2 years ago
- Deep Generative Modelling of Patient Timelines using Electronic Health Records☆63Updated 2 months ago
- Large Language Models to Identify Social Determinants of Health in Electronic Health Records | Paper: https://www.nature.com/articles/s41…☆46Updated last year
- Biomedical Question Answering Datasets.☆114Updated 3 months ago
- Vector Guideline Comparison for Medical Oncology☆36Updated last year
- public code repository for paper "Health system scale language models are general purpose clinical prediction engines"☆114Updated 2 years ago
- Almanac: Retrieval-Augmented Language Models for Clinical Medicine☆36Updated last year
- A deidentifier / deidentification pipeline developed by Stanford and Penn as part of the MIDRC organization.☆88Updated last year
- MEDIQA-Chat Shared Tasks @ ACL-ClinicalNLP 2023☆50Updated 2 years ago
- ☆42Updated 2 years ago
- ☆125Updated last year
- PLM-ICD: Automatic ICD Coding with Pretrained Language Models☆71Updated last year
- [ISMB 2024] Self-BioRAG: Improving Medical Reasoning through Retrieval and Self-Reflection with Retrieval-Augmented Large Language Models☆63Updated last year
- ☆62Updated 2 years ago
- Multimodal Question Answering in the Medical Domain: A summary of Existing Datasets and Systems☆298Updated last year