drivendataorg / snomed-ct-entity-linking-runtimeLinks
Runtime repository for the SNOMED CT Entity Linking challenge on DrivenData
☆14Updated last year
Alternatives and similar repositories for snomed-ct-entity-linking-runtime
Users that are interested in snomed-ct-entity-linking-runtime are comparing it to the libraries listed below
Sorting:
- Basic entity linker for the SNOMED EL Challenge☆13Updated last year
- A comprehensive NLP preprocessing package for clinical notes sentence boundary detection, tokenization☆32Updated last year
- Winners of the SNOMED CT Entity Linking Challenge☆40Updated last year
- General tutorials for the setup and use of MedCAT.☆39Updated 3 months ago
- Python package for managing OHDSI clinical data models. Includes support for LLM based plain text queries!☆47Updated last week
- ☆26Updated 2 months ago
- UMLS to SNOMED CT and ICD-10 mapping tool: A Python script for generating JSON files containing mappings between UMLS CUIs and SNOMED CT …☆14Updated 2 years ago
- An exploratory, tutorial and analytical view of the Unified Medical Language System (UMLS) & the software/technologies provided via being…☆44Updated last year
- [under development] ETL materials to support proposal for CDM enhancements for clinical trial data☆24Updated 4 years ago
- ☆23Updated 2 years ago
- Estimate similarity of medical concepts based on Unified Medical Language System (UMLS)☆16Updated 3 years ago
- A simple interface to inspect, improve and add concepts to biomedical NER+L -> MedCAT.☆84Updated last week
- ETL Tool for converting datasets to OMOP CDM☆33Updated 2 years ago
- FHIR Ontop OMOP Implementation☆20Updated last year
- Code base, outputs, scoring guidelines and annotations for ChatGPT NCCN evaluation | Paper: https://jamanetwork.com/journals/jamaoncology…☆18Updated 2 years ago
- Notebooks etc. Analysis of SNOMED-CT for the Clinical Coding Pilot and related work☆13Updated 4 years ago
- ☆66Updated 4 years ago
- Streamlined Data Mapping to OMOP☆19Updated this week
- ☆26Updated last month
- python library for graphical and continuous representations of ICD9 and ICD10 codes☆41Updated 7 months ago
- Don't worry about UMLS, RxNorm, SNOMED, or SemMedDB licensing - write code that knows how to download it automatically☆41Updated last year
- Sample code that demonstrates the use of the NCBO REST services☆44Updated last year
- A Python Natural Language Processing Toolkit for Medical Text Generation☆82Updated 3 months ago
- ☆55Updated 5 years ago
- Robust de-identification of medical notes using transformer architectures☆53Updated 3 years ago
- Natural Language to SQL Queries in the OMOP CDM Datasets☆12Updated 2 years ago
- [in development] Tools to support Natural Language Processing of freetext to create structured data elements for analysis☆33Updated last year
- Transform the OMOP model to graph model☆23Updated 8 months ago
- ☆11Updated 2 years ago
- ☆29Updated 4 years ago