MadhumitaSushil / OncLLMExtractionLinks
Expert-Curated Oncology Reports to Advance Language Model Inference
☆30Updated last year
Alternatives and similar repositories for OncLLMExtraction
Users that are interested in OncLLMExtraction are comparing it to the libraries listed below
Sorting:
- Large Language Models to Identify Social Determinants of Health in Electronic Health Records | Paper: https://www.nature.com/articles/s41…☆47Updated last year
- Clinical text summarization by adapting large language models☆149Updated last year
- Deep Generative Modelling of Patient Timelines using Electronic Health Records☆65Updated 4 months ago
- all scripts used in gatortron project☆125Updated 2 years ago
- A benchmark for few-shot evaluation of foundation models for electronic health records (EHRs)☆200Updated 5 months ago
- Code and data for TrialGPT.☆134Updated 9 months ago
- Official Codes for "Publicly Shareable Clinical Large Language Model Built on Synthetic Clinical Notes"☆113Updated last year
- Almanac: Retrieval-Augmented Language Models for Clinical Medicine☆36Updated last year
- Code for MedCPT, a model for zero-shot biomedical information retrieval.☆211Updated last year
- General tutorials for the setup and use of MedCAT.☆40Updated 5 months ago
- PMC-Patients: A Large-scale Dataset of Patient Summaries and Relations for Benchmarking Retrieval-based Clinical Decision Support Systems…☆70Updated last year
- A novel medical large language model family with 13/70B parameters, which have SOTA performances on various medical tasks☆162Updated 10 months ago
- public code repository for paper "Health system scale language models are general purpose clinical prediction engines"☆118Updated 2 years ago
- Vector Guideline Comparison for Medical Oncology☆38Updated last year
- MedAlign is a clinician-generated dataset for instruction following with electronic medical records.☆97Updated 5 months ago
- FEMR (Framework for Electronic Medical Records) provides tooling for large-scale, self-supervised learning using electronic health record…☆157Updated this week
- A Python Natural Language Processing Toolkit for Medical Text Generation☆84Updated 5 months ago
- Code repository to create the MIMIC-CDM Dataset.☆39Updated 9 months ago
- ☆25Updated last year
- ☆63Updated 2 years ago
- Leveraging☆12Updated last year
- Python module to parse UMLS source files☆20Updated 2 years ago
- PMC-Patients☆102Updated last year
- Code repository for the framework to engage in clinical decision making task using the MIMIC-CDM dataset.☆44Updated 9 months ago
- Med-BERT, contextualized embedding model for structured EHR data☆307Updated last year
- Code base, outputs, scoring guidelines and annotations for ChatGPT NCCN evaluation | Paper: https://jamanetwork.com/journals/jamaoncology…☆18Updated 2 years ago
- ☆42Updated last year
- Phe2vec: Automated Disease Phenotyping based on Unsupervised Embeddings from Electronic Health Records☆24Updated 4 years ago
- A private and secure generative AI tool, based on GPT and o models, deployed for non-clinical use at Dana-Farber Cancer Institute☆63Updated 9 months ago
- AIONER☆62Updated last year