Expert-Curated Oncology Reports to Advance Language Model Inference
☆34Apr 17, 2024Updated 2 years ago
Alternatives and similar repositories for OncLLMExtraction
Users that are interested in OncLLMExtraction are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Official Codes for "Publicly Shareable Clinical Large Language Model Built on Synthetic Clinical Notes"☆119Aug 22, 2024Updated last year
- Large Language Models to Identify Social Determinants of Health in Electronic Health Records | Paper: https://www.nature.com/articles/s41…☆51Jan 11, 2024Updated 2 years ago
- A private and secure generative AI tool, based on GPT and o models, deployed for non-clinical use at Dana-Farber Cancer Institute☆64Jan 28, 2025Updated last year
- Official Code Repository of "Tokenizing Single-Channel EEG with Time-Frequency Motif Learning". arXiv: https://arxiv.org/abs/2502.16060☆33Apr 22, 2026Updated 2 weeks ago
- Code base, outputs, scoring guidelines and annotations for ChatGPT NCCN evaluation | Paper: https://jamanetwork.com/journals/jamaoncology…☆18Aug 27, 2023Updated 2 years ago
- Deploy open-source AI quickly and easily - Special Bonus Offer • AdRunpod Hub is built for open source. One-click deployment and autoscaling endpoints without provisioning your own infrastructure.
- A novel medical large language model family with 13/70B parameters, which have SOTA performances on various medical tasks☆167Jan 15, 2025Updated last year
- GERNERMED++ is a transfer-learning-based open neural NER model for medical entities designed for German data.☆10Oct 20, 2023Updated 2 years ago
- This project develops compact transformer models tailored for clinical text analysis, balancing efficiency and performance for healthcare…☆18Mar 26, 2024Updated 2 years ago
- A curated collection of cutting-edge research at the intersection of machine learning and healthcare. This repository will be actively ma…☆34Mar 1, 2026Updated 2 months ago
- ☆15Jul 25, 2024Updated last year
- GenoCraft: A Comprehensive, User-Friendly Web Platform for High-Throughput Omics Data Analysis and Visualization (https://arxiv.org/pdf/2…☆19May 28, 2025Updated 11 months ago
- Hands-on repository for fine-tuning Large Language Models (LLMs) in the clinical domain with tutorials☆16Jan 9, 2026Updated 4 months ago
- ☆18Apr 8, 2024Updated 2 years ago
- Verifying Facts in LLM-Generated Clinical Text with Electronic Health Records☆32Jan 2, 2026Updated 4 months ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- Code for SyncTwin: Treatment Effect Estimation with Longitudinal Outcomes (NeurIPS 2021)☆12Nov 30, 2021Updated 4 years ago
- Code for "A Data-Centric Approach To Generate Faithful and High Quality Patient Summaries with Large Language Models"☆17Jul 20, 2025Updated 9 months ago
- Expert-level AI radiology report evaluator☆37Apr 1, 2025Updated last year
- Oncology Working Group Repository☆62Dec 31, 2025Updated 4 months ago
- ☆32Feb 6, 2026Updated 3 months ago
- ☆13Aug 6, 2019Updated 6 years ago
- BioMedBERT: A Pre-trained Biomedical Language Model for QA and IR☆33Feb 9, 2021Updated 5 years ago
- A Python Natural Language Processing Toolkit for Electronic Health Record Texts☆13May 24, 2023Updated 2 years ago
- Training HuggingFace models on EHR data☆46Nov 2, 2025Updated 6 months ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- [NeurIPS 2024 D&B] Official code for "EHRNoteQA: An LLM Benchmark for Real-World Clinical Practice Using Discharge Summaries"☆43Jan 11, 2025Updated last year
- Official repository of "EHR-SeqSQL : A Sequential Text-to-SQL Dataset For Interactively Exploring Electronic Health Records" (ACL 2024 Fi…☆17Jul 5, 2024Updated last year
- Saturn Cloud starter code for LLM Zoomcamp☆12Jul 1, 2024Updated last year
- Weak supervision methods for extracting real world evidence from EHRs☆35Apr 7, 2020Updated 6 years ago
- ☆10May 26, 2022Updated 3 years ago
- MedAlign is a clinician-generated dataset for instruction following with electronic medical records.☆98May 17, 2025Updated 11 months ago
- ☆52Jun 23, 2024Updated last year
- Zero-shot clinical trial matching with LLMs☆17Mar 1, 2025Updated last year
- Transformers for Clinical NLP☆29Apr 17, 2026Updated 3 weeks ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- [CHIL 2024] Interpretation of Intracardiac Electrograms Through Textual Representations☆12Sep 4, 2024Updated last year
- Fact Verification for Clinical Notes with LLMs☆41Dec 22, 2025Updated 4 months ago
- Code and data for TrialGPT.☆148Jan 24, 2025Updated last year
- The Vini in silico model of cancer☆12Mar 7, 2026Updated 2 months ago
- [EMNLP 2023] FaMeSumm: Investigating and Improving Faithfulness of Medical Summarization. Support BART, PEGASUS, T5, mT5, BioBART, etc.☆13Jan 5, 2024Updated 2 years ago
- DiReCT: Diagnostic Reasoning for Clinical Notes via Large Language Models (NeurIPS 2024 D&B Track)☆23Mar 6, 2025Updated last year
- Benchmark Datasets for BioNLP Tasks☆17May 7, 2025Updated last year