Alternatives and similar repositories for aplusml:

Users that are interested in aplusml are comparing it to the libraries listed below

• Medical-Event-Data-Standard / meds
  Schema definitions and Python types for Medical Event Data Standard, a standard for medical event data such as EHR and claims data
  ☆49Updated 2 weeks ago
• Medical-Event-Data-Standard / meds_etl
  A collection of ETLs from common data formats to Medical Event Data Standard
  ☆28Updated last week
• som-shahlab / ehr_ml
  Code for doing machine learning with various EHRs
  ☆21Updated 2 years ago
• MIT-LCP / bloatectomy
  A python package for removing duplicate text in clinical notes or other documents
  ☆36Updated 4 years ago
• OHDSI / MIMIC
  MIMIC (Medical Information Mart for Intensive Care) is a large, single-center database comprising information relating to patients admitt…
  ☆76Updated this week
• CogStack / Foresight
  Deep Generative Modelling of Patient Timelines using Electronic Health Records
  ☆55Updated last year
• AIM-Harvard / SDoH
  Large Language Models to Identify Social Determinants of Health in Electronic Health Records | Paper: https://www.nature.com/articles/s41…
  ☆43Updated last year
• MadhumitaSushil / OncLLMExtraction
  Expert-Curated Oncology Reports to Advance Language Model Inference
  ☆27Updated 11 months ago
• ajk77 / SimpleEMRSystem
  The Simple EMR System is a rapidly deployable and readily customizable electronic medical record (EMR) user interface for supporting labo…
  ☆19Updated 8 months ago
• HPIMS / phe2vec
  Phe2vec: Automated Disease Phenotyping based on Unsupervised Embeddings from Electronic Health Records
  ☆24Updated 4 years ago
• yikuan8 / MIMIC-IV-Postgres
  Installing MIMIC-IV in a local Postgres database
  ☆40Updated 3 years ago
• deepmedicine / Targeted-BEHRT
  Targeted-BEHRT: Deep Learning for Observational Causal Inference on Longitudinal Electronic Health Records
  ☆20Updated 2 years ago
• justin13601 / ACES
  [ICLR 2025] ACES: Automatic Cohort Extraction System for Event-Streams
  ☆30Updated this week
• MLD3 / FIDDLE
  FlexIble Data-Driven pipeLinE – a preprocessing pipeline that transforms structured EHR data into feature vectors to be used with ML algo…
  ☆92Updated 9 months ago
• asappresearch / clip
  ☆29Updated 3 years ago
• mmcdermott / MEDS_transforms
  A simple set of MEDS polars-based ETL and transformation functions
  ☆29Updated this week
• ratschlab / circEWS
  circEWS public code
  ☆67Updated 5 months ago
• mghassem / medicationCategories
  Quick script to parse out medications from discharge summaries in MIMIC format. Not that this approach uses minimal NLP, and can be vatly…
  ☆29Updated 7 years ago
• DATEXIS / UMLSParser
  Python module to parse UMLS source files
  ☆19Updated 2 years ago
• deepmedicine / BEHRT
  Code for BEHRT: Transformer for Electronic Health Records
  ☆109Updated last year
• Lybarger / sdoh_extraction
  ☆17Updated last year
• sajaddarabi / TAPER-EHR
  Patient Code & Text Representation Learning
  ☆20Updated last year
• skparr / ml_loinc_mapping
  ☆16Updated 6 years ago
• ZhiGroup / pytorch_ehr
  source codes based on PyTorch to analyze EHR
  ☆135Updated last year
• DigitalBiomarkerDiscoveryPipeline / Digital_Health_Data_Repository
  The DHDR (Digital Health Data Repository) is a repository with sample data for use with the DBDP.
  ☆43Updated 3 weeks ago
• cumc-dbmi / cehrbert
  CEHR-BERT: Incorporating temporal information from structured EHR data to improve prediction tasks
  ☆36Updated this week
• CogStack / MedCATtutorials
  General tutorials for the setup and use of MedCAT.
  ☆37Updated 2 months ago
• kind-lab / mimic-fhir
  A version of MIMIC-IV in FHIR
  ☆42Updated 5 months ago
• clinicalml / omop-learn
  Python package for machine learning for healthcare using a OMOP common data model
  ☆108Updated last year
• landiisotta / convae_architecture
  ☆38Updated 3 years ago