A Framework for Chromatin Architecture Data Processing, Handling and Analysis
☆11Jul 19, 2026Updated this week
Alternatives and similar repositories for Bloom
Users that are interested in Bloom are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- singleCellNet in Python☆18Feb 25, 2026Updated 4 months ago
- Integrated Genome Modeling (IGM): multi-modal data-driven simulator of genome structures☆12Jun 15, 2023Updated 3 years ago
- The project is an accurate 3D Physics Simulation of Nuclear Fission and Nuclear Fusion. The simulation will show the atomic level of int…☆16May 10, 2017Updated 9 years ago
- Biblioteca Python para a criação de desenhos e sistemas físicos☆10Feb 12, 2022Updated 4 years ago
- Data/analysis repository for "Interrogation of human hematopoiesis..." paper☆21Jul 9, 2019Updated 7 years ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- Langmuir is a Monte Carlo charge dynamics simulation engine for organic semiconductors, including FETs and solar cells☆14Apr 29, 2016Updated 10 years ago
- ☆17Apr 4, 2020Updated 6 years ago
- ☆12Dec 12, 2018Updated 7 years ago
- Materials presented at the BiocNYC meet-up☆12Nov 29, 2018Updated 7 years ago
- ☆15Jan 13, 2020Updated 6 years ago
- Architectural stripe detection from 3D genome conformation data☆19Sep 15, 2025Updated 10 months ago
- FreeHi-C pipeline for high fidelity Hi-C data simulation.☆12Jul 13, 2021Updated 5 years ago
- GENome Organisation Visual Analytics☆16Dec 24, 2021Updated 4 years ago
- ☆14Aug 31, 2016Updated 9 years ago
- Virtual machines for every use case on DigitalOcean • AdGet dependable uptime with 99.99% SLA, simple security tools, and predictable monthly pricing with DigitalOcean's virtual machines, called Droplets.
- Python bindings to UCSC BigWig and BigBed library☆36Jun 22, 2026Updated 3 weeks ago
- A supervised learning model based on Graph Neural Network to predict gene co-expression from chromatin contacts☆12Mar 22, 2023Updated 3 years ago
- ☆18Mar 12, 2024Updated 2 years ago
- Optical simulation tool for thin-film layer stacks☆21Feb 26, 2018Updated 8 years ago
- ATAC-seq processing pipeline☆34Apr 8, 2022Updated 4 years ago
- Color DNA/RNA bases in terminal output☆21Aug 29, 2017Updated 8 years ago
- ☆15Nov 23, 2023Updated 2 years ago
- ☆13Jun 25, 2021Updated 5 years ago
- ☆19Aug 29, 2025Updated 10 months ago
- Managed Database hosting by DigitalOcean • AdPostgreSQL, MySQL, MongoDB, Kafka, Valkey, and OpenSearch available. Automatically scale up storage and focus on building your apps.
- ATAC-seq Pipeline in conjunction with Duygu Ucar & Jacques Banchereau Laboratories☆12Apr 3, 2019Updated 7 years ago
- ProSolo, variant calling from single cell DNA-seq data, or: bulk backing vocals for single cell solos.☆21Sep 1, 2021Updated 4 years ago
- nanoNOMe (Nucleosome Occupancy and Methylome nanopore sequencing) Analysis☆20Nov 18, 2022Updated 3 years ago
- Python implementation of HiCRep stratum-adjusted correlation coefficient of Hi-C data with Cooler sparse contact matrix support☆43Jan 31, 2024Updated 2 years ago
- Uma biblioteca em python para propagação de erro e conversão de unidades utilizando os métodos que os professores de lab de física do IFS…☆18Apr 12, 2019Updated 7 years ago
- ATAC_seq Workshop☆13Feb 16, 2018Updated 8 years ago
- Materials for Spring 2019 Applied Genomics Course☆21Apr 22, 2019Updated 7 years ago
- Analysing Capture Seq Count Data☆13Jun 11, 2018Updated 8 years ago
- rbioapi: User-Friendly R Interface to Biologic Web Services' API☆24Jan 26, 2026Updated 5 months ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- A Python package for fast operations on 1-dimensional genomic signal tracks☆23Apr 3, 2020Updated 6 years ago
- Notes on single-cell Hi-C technologies, tools, and data☆89Jun 29, 2026Updated 3 weeks ago
- ☆17Jan 3, 2019Updated 7 years ago
- ☆20Jun 8, 2023Updated 3 years ago
- An introduction about the Genome-in-a-Bottle project☆26Aug 30, 2019Updated 6 years ago
- https://celehs.github.io/PheCAP/☆23Jun 24, 2021Updated 5 years ago
- a tool for creating Molecular Dynamics-ready models of polymeric systems☆24Feb 25, 2019Updated 7 years ago