IrinaVKuznetsova / OmicsVolcano
☆10Updated 10 months ago
Alternatives and similar repositories for OmicsVolcano:
Users that are interested in OmicsVolcano are comparing it to the libraries listed below
- Machine learning use cases for teaching☆13Updated 7 years ago
- Building the constrained coding regions (CCR) model☆16Updated 6 years ago
- R Interface to the NCBI SRA metadata☆23Updated 6 years ago
- Clonal reconstruction from HTS data☆10Updated 3 years ago
- Allele-Specific Quantification of Structural Variations in Cancer Genomes☆17Updated 6 years ago
- Mostly deprecated in favor of : https://github.com/hbc/bcbioRNASeq. Quality control, differential gene/transcript expression and pathway …☆24Updated 7 years ago
- iDEP: integrated Differential Expression & Pathway analysis☆15Updated 6 years ago
- Converts 'MultiQC' Reports into Tidy Data Frames☆18Updated 11 months ago
- Tools for generating and decoding error-correcting DNA barcodes☆16Updated 3 years ago
- R function to plot high quality, elegant heatmap using 'ggplot2' graphics . Some of the important features of this package are, colorin…☆11Updated 8 years ago
- BED QC tool (in the making)☆16Updated 2 years ago
- ☆13Updated 7 years ago
- Python wrapper for ipath3☆10Updated last year
- RNA-seq quantifications: gene expression responses to human rhinovirus infection for 6 asthmatic and 6 non-asthmatic donors (SRP046226)☆19Updated 7 years ago
- Accurate and fast taxonomic classification using pseudoaligning☆21Updated 7 years ago
- R package to quickly obtain count vectors from indexed bam files☆15Updated 3 years ago
- ProSolo, variant calling from single cell DNA-seq data, or: bulk backing vocals for single cell solos.☆22Updated 3 years ago
- Artisanal 🤣 bioinformatics tools and pipelines in Scala☆20Updated 5 years ago
- TOP results by CONfident efFECT Sizes.☆14Updated 3 months ago
- FRAMA: From RNA-seq data to annotated mRNA assemblies☆12Updated 6 years ago
- AnaLysis routines for ePigenomicS data - 🏫 Bioconductor project☆16Updated last year
- A program for fast and accurate genome-guided transcripts reconstruction and quantification from RNA-seq (Supporting Pacbio single-end)☆23Updated 3 years ago
- Distinguishing between generic and experiment-specific gene expression signals.☆12Updated 2 years ago
- Library for indexing VCF files for random access searches by rsID☆17Updated last year
- The `multiGSEA` R package was designed to run a robust GSEA-based pathway enrichment for multiple omics layers.☆18Updated 2 months ago
- integrative pathway analysis with modern PCA methodology and gene selection☆11Updated last year
- A small repo for storing the code for making the files and html for CCRs.☆22Updated 5 years ago
- A JBrowse plugin for creating sashimi or junction style plots from RNA-seq data☆14Updated 3 years ago
- Allele frequency filter app☆14Updated 2 years ago
- ☆24Updated 4 years ago