IrinaVKuznetsova / OmicsVolcanoView external linksLinks
☆11May 27, 2024Updated last year
Alternatives and similar repositories for OmicsVolcano
Users that are interested in OmicsVolcano are comparing it to the libraries listed below
Sorting:
- PePPer - Personalized Perturbation Profiler☆11Oct 4, 2018Updated 7 years ago
- Subset of Galaxy (http://galaxyproject.org/) core code designed to be used as a library.☆12Jul 22, 2020Updated 5 years ago
- Helper script for bioconductor/bioconductor_docker☆13Feb 9, 2026Updated last week
- Mutation rate analysis of autosomal loci☆15Jun 25, 2020Updated 5 years ago
- Simple matching of HTS samples based on HLA typing☆13Jan 4, 2017Updated 9 years ago
- Galaxy Github repository BETA 1. May be destroyed and recreated if post-conversion problems are found (but post-conversion commits on thi…☆12Feb 20, 2015Updated 10 years ago
- Python client for GA4GH htsget protocol☆15Nov 7, 2022Updated 3 years ago
- Statistical properties of polygenic risk scores☆19Oct 16, 2019Updated 6 years ago
- Building SuperTranscripts: A linear representation of transcriptome data☆68Mar 22, 2021Updated 4 years ago
- Application for hosting gene expression and ontology data with Shiny☆17Jan 8, 2018Updated 8 years ago
- Template for building a bioconductor workshop package using github actions☆21Jun 26, 2025Updated 7 months ago
- Somatic (mosaic) SNV caller for 10X Genomics data using random forest classification and feature-based filters☆23Apr 1, 2019Updated 6 years ago
- ☆23Nov 9, 2025Updated 3 months ago
- Create QC and summary reports for Alevin output☆31Jan 27, 2026Updated 2 weeks ago
- Improved multi-sample transcript abundance estimates using adaptive priors☆20Oct 29, 2018Updated 7 years ago
- utilities for working with IGV: opening files remotely in either desktop IGV or a web viewer (igv.js), creating screenshots, etc.☆49May 7, 2019Updated 6 years ago
- Indel-aware consensus for aligned BAM☆21Aug 16, 2025Updated 6 months ago
- fast webservices based query tool for large sets of genomic features☆25May 10, 2025Updated 9 months ago
- A collection of tools to deal with Bisulfite-seq/NOMe-seq (SNP/Methylation calling: BisSNP; HMM segmentation: DMNTools; Visualization/Clu…☆32Nov 10, 2021Updated 4 years ago
- ☆11Oct 7, 2025Updated 4 months ago
- Program and links to the material for the GloBIAS Training School 2025, Kobe, Japan.☆22Oct 27, 2025Updated 3 months ago
- Ensembl tools☆34Nov 3, 2025Updated 3 months ago
- Python3 module for running MUMmer and reading the output☆34Mar 24, 2025Updated 10 months ago
- Reducing reference bias using multiple population reference genomes☆34May 27, 2024Updated last year
- Accurate, Lightweight Clustering of de novo Transcriptomes using Fragment Equivalence Classes☆31Jun 16, 2024Updated last year
- ☆35May 23, 2022Updated 3 years ago
- Analysis examples based on the ISB-CGC hosted TCGA data, using R and R Markdown.☆31Nov 27, 2017Updated 8 years ago
- Clonal reconstruction from HTS data☆10Oct 27, 2021Updated 4 years ago
- Kyoto Encylopedia of Genes and Genomes (KEGG) NetworkX Topological parser automates downloading, parsing, and converting from a KEGG Mark…☆11May 8, 2024Updated last year
- This repository is the working directory for the Garnet-Forest bundle of python scripts for analyzing diverse forms of 'omic' data in a n…☆31Jan 9, 2019Updated 7 years ago
- A collection of code (mostly Jupyter notebooks) associated with entries on my blog☆12Oct 8, 2017Updated 8 years ago
- ☆11Nov 30, 2024Updated last year
- Explore design matrices interactively with R/Shiny☆38Oct 29, 2025Updated 3 months ago
- RaMWAS: Fast Methylome-Wide Association Study Pipeline for Enrichment Platforms☆10Sep 22, 2021Updated 4 years ago
- A project for exploring differentially active signaling paths related to proteomics datasets☆45Jul 30, 2025Updated 6 months ago
- Divine: Prioritizing Genes for Rare Mendelian Disease in Whole Exome Sequencing Data☆13Apr 18, 2019Updated 6 years ago
- 16S rRNA Sequencing Data from the Human Microbiome Project☆10Oct 30, 2025Updated 3 months ago
- The curatedOvarianData package provides data for gene expression analysis in patients with ovarian cancer☆11Oct 30, 2025Updated 3 months ago
- community detection in multiplex networks☆10Apr 23, 2016Updated 9 years ago