SomaLogic / SomaDataIOLinks
The SomaDataIO package loads and exports 'SomaScan' data via the 'SomaLogic Operating Co., Inc.' proprietary data file, called an ADAT ('*.adat'). The package also exports auxiliary functions for manipulating, wrangling, and extracting relevant information from an ADAT object once in memory.
☆27Updated last month
Alternatives and similar repositories for SomaDataIO
Users that are interested in SomaDataIO are comparing it to the libraries listed below
Sorting:
- R data package for annotating/converting Gene IDs☆166Updated 3 months ago
- Olink R package: A collection of functions to facilitate analysis of proteomic data from Olink. The goal of this package is to help users…☆119Updated this week
- Contribute Packages to Bioconductor☆142Updated 5 months ago
- An R interface to enrichR☆92Updated 8 months ago
- Brings bulk and pseudobulk transcriptomics to the tidyverse☆172Updated this week
- Seurat meets tidyverse. The best of both worlds.☆159Updated last week
- Updated implementation of the GSEA-P R application for modern R distributions☆97Updated 3 years ago
- Tools for manipulating annotated data matrices☆92Updated 3 years ago
- Course material for CSAMA: Statistical Data Analysis for Genome Scale Biology☆94Updated last year
- Data from Lewis, Barnes, Blighe et al., Cell Rep. 2019 Aug 27; 28(9): 2455–2470.e5.☆121Updated 5 years ago
- gwasrapidd: an R package to query, download and wrangle GWAS Catalog data☆99Updated 4 months ago
- Quantify and interpret divers of variation in multilevel gene expression experiments☆67Updated last month
- 🌲 An easy-to-use and scalable toolkit for genomic alteration signature (a.k.a. mutational signature) analysis and visualization in R htt…☆154Updated last month
- Code for evaluation of differential expression methods in single-cell RNA-seq data☆112Updated 5 years ago
- netZooR is a network biology package implemented in R.☆112Updated last month
- make enriched heatmap which visualizes the enrichment of genomic signals to specific target regions.☆196Updated last year
- R package for querying the OMIM database☆17Updated 3 weeks ago
- MSigDB gene sets for multiple organisms in a tidy data format☆82Updated 2 months ago
- Power analysis is essential to optimize the design of RNA-seq experiments and to assess and compare the power to detect differentially ex…☆107Updated 2 years ago
- Make Interactive Complex Heatmaps☆138Updated last year
- Interactive Cytometry Data Analysis☆67Updated this week
- Easily install and load packages from the tidyomcis ecosystem☆68Updated last year
- The bridge between the NCBI Gene Expression Omnibus and Bioconductor☆100Updated last month
- ☆26Updated 4 years ago
- Devel repository for minfi☆60Updated last year
- ☆27Updated 4 years ago
- R data package for pre-compiled somatic mutations from TCGA cohorts and CCLE☆97Updated last year
- DEP package☆28Updated 3 years ago
- Visualization of Functional Enrichment Result☆248Updated 3 weeks ago
- Clone of the Bioconductor repository for the scater package.☆97Updated 7 months ago