SomaLogic / SomaDataIOLinks
The SomaDataIO package loads and exports 'SomaScan' data via the 'SomaLogic Operating Co., Inc.' proprietary data file, called an ADAT ('*.adat'). The package also exports auxiliary functions for manipulating, wrangling, and extracting relevant information from an ADAT object once in memory.
☆25Updated last month
Alternatives and similar repositories for SomaDataIO
Users that are interested in SomaDataIO are comparing it to the libraries listed below
Sorting:
- Quantify and interpret divers of variation in multilevel gene expression experiments☆63Updated 5 months ago
- gwasrapidd: an R package to query, download and wrangle GWAS Catalog data☆96Updated last week
- An R interface to enrichR☆92Updated 4 months ago
- MSigDB gene sets for multiple organisms in a tidy data format☆76Updated 3 weeks ago
- R data package for annotating/converting Gene IDs☆163Updated 2 years ago
- LDlinkR☆59Updated last year
- Olink R package: A collection of functions to facilitate analysis of proteomic data from Olink. The goal of this package is to help users…☆110Updated this week
- scDataviz: single cell dataviz and downstream analyses☆63Updated 3 years ago
- Tools for manipulating annotated data matrices☆92Updated 3 years ago
- ☆26Updated 3 years ago
- Devel repository for minfi☆61Updated last year
- Toolbox with R scripts☆38Updated 6 years ago
- Repository for Short Course: Deep Learning in Omics☆17Updated 3 years ago
- Easily install and load packages from the tidyomcis ecosystem☆67Updated last year
- ☆27Updated 4 years ago
- cytofkit: an integrated flow/mass cytometry data analysis pipeline☆58Updated 4 years ago
- Power analysis is essential to optimize the design of RNA-seq experiments and to assess and compare the power to detect differentially ex…☆106Updated last year
- Visualise correlation results and test significancies of these☆23Updated 5 years ago
- Brings bulk and pseudobulk transcriptomics to the tidyverse☆172Updated 2 months ago
- This package contains a reference-based function to infer the proportions of a priori known cell subtypes present in a sample representin…☆50Updated 6 months ago
- Seurat meets tidyverse. The best of both worlds.☆160Updated 10 months ago
- Brings SingleCellExperiment objects to the tidyverse☆36Updated 5 months ago
- Code for biostar tutorials - mostly R and Perl☆50Updated 10 months ago
- An R Package for Geneset Enrichment Workflows☆76Updated last week
- A Toolkit for Construct Tree-shaped Trajectory for Flow and Mass Cytometry data☆28Updated 4 years ago
- Bioconductor package for management of multi-assay data☆72Updated last month
- Longitudinal multi-omics analysis identifies responses of megakaryocytes, erythroid cells and plasmablasts as hallmarks of severe COVID-1…☆11Updated 4 years ago
- ATAC_seq Workshop☆14Updated 7 years ago
- A collection of functions for working with DNA methylation microarrays (quality control, pre-processing, LC estimation, ...)☆25Updated last week
- Find causal cell-types underlying complex trait genetics☆85Updated 3 months ago