SomaLogic / SomaDataIOLinks
The SomaDataIO package loads and exports 'SomaScan' data via the 'SomaLogic Operating Co., Inc.' proprietary data file, called an ADAT ('*.adat'). The package also exports auxiliary functions for manipulating, wrangling, and extracting relevant information from an ADAT object once in memory.
☆29Updated last month
Alternatives and similar repositories for SomaDataIO
Users that are interested in SomaDataIO are comparing it to the libraries listed below
Sorting:
- Olink R package: A collection of functions to facilitate analysis of proteomic data from Olink. The goal of this package is to help users…☆124Updated last week
- R data package for annotating/converting Gene IDs☆166Updated 5 months ago
- Contribute Packages to Bioconductor☆145Updated 8 months ago
- An R interface to enrichR☆93Updated 10 months ago
- Seurat meets tidyverse. The best of both worlds.☆160Updated last month
- Course material for CSAMA: Statistical Data Analysis for Genome Scale Biology☆94Updated last year
- Tools for manipulating annotated data matrices☆92Updated 4 years ago
- Brings bulk and pseudobulk transcriptomics to the tidyverse☆175Updated last month
- Data from Lewis, Barnes, Blighe et al., Cell Rep. 2019 Aug 27; 28(9): 2455–2470.e5.☆121Updated 5 years ago
- Easily install and load packages from the tidyomics ecosystem☆72Updated 2 months ago
- Updated implementation of the GSEA-P R application for modern R distributions☆99Updated 4 years ago
- The bridge between the NCBI Gene Expression Omnibus and Bioconductor☆103Updated last month
- Enjoy your transcriptomic data and analysis responsibly - like sipping a cocktail☆79Updated 3 weeks ago
- Interactive Cytometry Data Analysis☆67Updated last month
- Quantify and interpret divers of variation in multilevel gene expression experiments☆69Updated last month
- Using R and Bioconductor packages for the analysis and comprehension of proteomics data.☆99Updated 4 months ago
- MSigDB gene sets for multiple organisms in a tidy data format☆84Updated 5 months ago
- Make Interactive Complex Heatmaps☆138Updated last year
- Cytometry dATa anALYsis Tools☆70Updated last month
- 🌲 An easy-to-use and scalable toolkit for genomic alteration signature (a.k.a. mutational signature) analysis and visualization in R htt…☆158Updated 3 weeks ago
- Power analysis is essential to optimize the design of RNA-seq experiments and to assess and compare the power to detect differentially ex…☆107Updated 2 years ago
- Bioconductor package for management of multi-assay data☆74Updated last month
- The package wrapping the book, for deployment via the Bioconductor build system.☆97Updated last year
- gwasrapidd: an R package to query, download and wrangle GWAS Catalog data☆100Updated 7 months ago
- Bayesian mixed-effect model to test differences in cell type proportions from single-cell data, in R☆117Updated last week
- R package for querying the OMIM database☆17Updated 3 months ago
- Efficient algorithms for analyzing DNA methylation data.☆57Updated 2 months ago
- An S3 data object and framework for common quantitative proteomic analyses☆47Updated last week
- EDA, QC, and DESeq2 / edgeR analysis of 109 RNA-seq samples of immunotherapy treatment☆55Updated 2 years ago
- DEP package☆30Updated 3 years ago