USUM: Plotting sequence similarity using USEARCH & UMAP & t-SNE
β15Feb 26, 2021Updated 5 years ago
Alternatives and similar repositories for usum
Users that are interested in usum are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Manage multiple Cloudflare Workers + Wrangler projects with Lerna πΌβ11Dec 10, 2022Updated 3 years ago
- β16Sep 8, 2024Updated 2 years ago
- luigi based workflow for analysising WGS samples collecting from different source. It will auto clustering, annotating gene or species, aβ¦β10Nov 28, 2023Updated 2 years ago
- β16Nov 27, 2018Updated 7 years ago
- Main xCurator monorepoβ10Dec 20, 2023Updated 2 years ago
- GPU virtual machines on DigitalOcean Gradient AI β’ AdGet to production fast with high-performance AMD and NVIDIA GPUs you can spin up in seconds. The definition of operational simplicity.
- bioinformatics visualization tools with pyviz/bokehβ20Sep 30, 2023Updated 2 years ago
- PROGENY Python implementationβ12Apr 5, 2022Updated 4 years ago
- β10Dec 14, 2016Updated 9 years ago
- Must-read papers on AI for Biologyβ28Oct 4, 2023Updated 2 years ago
- An efficient tool for large-scale correlation network analysisβ15Dec 27, 2024Updated last year
- Dorothea package in Pythonβ11Apr 5, 2022Updated 4 years ago
- Documentation about terrarium controllerβ12Apr 14, 2023Updated 3 years ago
- Transpile from Julia to Pythonβ17Jul 20, 2026Updated 2 months ago
- β20Jul 16, 2021Updated 5 years ago
- End-to-end encrypted cloud storage - Proton Drive β’ AdSpecial offer: 40% Off Yearly / 80% Off First Month. Protect your most important files, photos, and documents from prying eyes.
- nf-core/references is a bioinformatics pipeline that build references, for multiple use casesβ23Updated this week
- Integrating long read sequencing enhances short read-based locus-specific transposable element quantificationβ12May 12, 2025Updated last year
- β13Dec 6, 2022Updated 3 years ago
- Biotechnology protocols improved with Artificial Intelligence for the MIT biotechnology tournament iGem 2019. Check out our website!β12Dec 12, 2019Updated 6 years ago
- Quantifying the significance of genetic variation using probabilistic profile-based methods.β19Apr 21, 2021Updated 5 years ago
- Genomic Features in Python from BioConductor's AnnotationHubβ22Updated this week
- Code for the paper Aligning Distant Sequences to Graphs using Long Seed Sketches.β13Nov 1, 2022Updated 3 years ago
- some implementations of the unsupervised algorithm of quantum clusteringβ18Mar 8, 2017Updated 9 years ago
- Tools to work with 23andMe and AncestryDNA raw filesβ12Aug 5, 2017Updated 9 years ago
- GPUs on demand by Runpod - Special Offer Available β’ AdRun AI, ML, and HPC workloads on powerful cloud GPUsβwithout limits or wasted spend. Deploy GPUs in under a minute and pay by the second.
- An easy-to-use and interactive web application for FragPipeβ15Mar 8, 2026Updated 6 months ago
- Pipeline for metagenome and metatranscriptome joint assemblyβ21Mar 3, 2023Updated 3 years ago
- Proving grounds for the idea of a youtube series. Libraries in 100 lines or less. Many languages.β18Sep 16, 2020Updated 6 years ago
- iFISH Probe Design: a Python3 package to build iFISH probes.β12Mar 11, 2022Updated 4 years ago
- Artificial Intelligence in Transportationβ17Jun 6, 2020Updated 6 years ago
- A source code to replicate Sakaue S. et al. Nat Commun. 2020.β15Oct 29, 2020Updated 5 years ago
- Fast implementation of the neighbour-joining phylogenetic inference methodβ23May 23, 2020Updated 6 years ago
- β13Apr 8, 2026Updated 5 months ago
- Multi-study integration of cellular trajectoriesβ19Jun 1, 2020Updated 6 years ago
- Managed hosting for WordPress and PHP on Cloudways β’ AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- CoRA Docsβ37May 18, 2026Updated 4 months ago
- Tool comparison for detecting differentially expressed individual transposable elementsβ12Jan 7, 2022Updated 4 years ago
- The most comprehensive debouncer for Elmβ14Nov 28, 2018Updated 7 years ago
- Fourth place solution to the "OpenVaccine: COVID-19 mRNA Vaccine Degradation Prediction" organized by Stanford University and Kaggleβ21Oct 16, 2020Updated 5 years ago
- Talk demonstrating how to massively optimise data processing and numerical computation in Pythonβ24Feb 16, 2020Updated 6 years ago
- β26Nov 13, 2021Updated 4 years ago
- Jupyter Notebook to demonstrate the use of Neural Networks for Transcription Factor Binding Site Predictionβ13Jun 20, 2017Updated 9 years ago