daifengwanglab / CMOTLinks
Cross Modality Optimal Transport for multimodal inference
☆10Updated last year
Alternatives and similar repositories for CMOT
Users that are interested in CMOT are comparing it to the libraries listed below
Sorting:
- Deep learning reveals predictive sequence concepts within immune repertoires to immunotherapy☆15Updated 3 years ago
- ☆60Updated last year
- SpatialGlue is a novel deep learning methods for spatial multi-omics data integration.☆77Updated last year
- Dependency-aware deep generative models for multitasking analysis of spatial genomics data☆40Updated last year
- Deconvoluting Spatial Transcriptomics Data through Graph-based Artificial Intelligence☆39Updated 3 years ago
- ☆70Updated 6 months ago
- domain adaptation of spatial and single-cell transcriptome☆28Updated last year
- Identify spatial domain☆88Updated 8 months ago
- Simultaneous deep generative modeling and clustering of single cell genomic data☆32Updated 3 years ago
- scDCC: Single Cell Deep Constrained Clustering☆43Updated last year
- ☆20Updated last week
- Pytorch implementation of scDeepCluster for Single Cell RNA-seq data☆34Updated last year
- resVAE is a restricted latent variational autoencoder that we wrote to uncover hidden structures in gene expression data, especially usin…☆12Updated 3 years ago
- a unified single-cell data integration framework by optimal transport☆35Updated last year
- Deep learning-based tissue compositions and cell-type-specific gene expression analysis with tissue-adaptive autoencoder (TAPE)☆58Updated last year
- ☆14Updated 3 years ago
- Tutorials on using latest dynamo package☆26Updated last month
- Deep Generative Modeling of RNA Velocity☆37Updated 3 months ago
- Creating multi-resolution embeddings and clusters from high dimensional data☆58Updated last year
- ☆15Updated 3 years ago
- ☆10Updated 3 years ago
- A generative topic model that facilitates integrative analysis of large-scale single-cell RNA sequencing data.☆52Updated 4 years ago
- ☆31Updated 2 years ago
- ☆52Updated 3 weeks ago
- A unified approach for integrating spatial and single-cell transcriptomics data by leveraging deep generative models☆77Updated last year
- Construction of a 3D whole organism spatial atlas by joint modeling of multiple slices☆69Updated 2 years ago
- An optimal transport-based algorithm for inferring cell trajectories of spatial transcriptomics.☆35Updated 10 months ago
- Flow2Spatial reconstructs spatial proteomics through transfer learning.☆23Updated 8 months ago
- ☆51Updated 11 months ago
- ☆116Updated last week