Alternatives and similar repositories for hooknet

Users that are interested in hooknet are comparing it to the libraries listed below

• DIAGNijmegen / pathology-hooknet
  ☆62Updated 9 months ago
• DIAGNijmegen / pathology-he-auto-augment
  H&E tailored Randaugment: automatic data augmentation policy selection for H&E-stained histopathology.
  ☆55Updated 2 years ago
• vqdang / H2T
  ☆35Updated 2 years ago
• wenqi006 / SlideGraph
  ☆55Updated 3 years ago
• SBU-BMI / quip_cancer_segmentation
  ☆16Updated 2 years ago
• TissueImageAnalytics / CoNIC
  CoNIC Challenge
  ☆66Updated last year
• andreped / fast-stain-normalization
  GPU-accelerated stain normalization command line tool
  ☆22Updated last year
• mahmoodlab / CRANE
  Deep learning enabled assessment of cardiac allograft rejection from endomyocardial biopsies- Nature Medicine
  ☆32Updated 3 years ago
• alexjfoote / reetoolbox
  Toolbox for measuring adversarial robustness to many transforms
  ☆19Updated 2 months ago
• YashSharma / C2C
  Implementation of Cluster-to-Conquer: A Framework for End-to-End Multi-Instance Learning for Whole Slide Image Classification approach.
  ☆61Updated 3 years ago
• KatherLab / HIA
  Histopathology Image Analysis
  ☆92Updated 2 years ago
• AGFoersch / MultiStainDeepLearning
  Code from Foersch et al. (Under Construction / Development)
  ☆37Updated 2 years ago
• lucasrla / wsi-preprocessing
  Simple library for preprocessing histopathological whole-slide images (WSI) into tiles (a.k.a. patches) towards deep learning
  ☆55Updated last year
• PathologyDataScience / NuCLS
  NuCLS: A scalable crowdsourcing, deep learning approach and dataset for nucleus classification, localization and segmentation
  ☆54Updated 3 years ago
• hrlblab / CS-MIL
  ☆53Updated 3 months ago
• lucasrla / wsi-tile-cleanup
  Image filters for digital pathology: detect pen marks, background, and artifacts. Use them for preprocessing towards deep learning
  ☆28Updated 4 years ago
• simongraham / hovernet_inference
  HoVer-Net inference code for simultaneous nuclear segmentation and classification
  ☆68Updated 2 years ago
• mdsatria / MultiAttentionMIL
  ECCV-AIMIA 2022 paper: "Multi-Scale Attention-based Multiple Instance Learning for Classification of Multi-Gigapixel Histology Images"
  ☆12Updated 2 years ago
• sebastianffx / stainlib
  Python 3 library for the augmentation & normalization of H&E images
  ☆57Updated 2 years ago
• PathologyDataScience / HiPS
  Histomic Prognostic Signature (HiPS): A population-level computational histologic signature for invasive breast cancer prognosis
  ☆30Updated last year
• MaryamHaghighat / PathProfiler
  Pipeline for computational pathology
  ☆38Updated last year
• TissueImageAnalytics / PanNuke-metrics
  Evaluation code for the PanNuke dataset
  ☆28Updated 4 years ago
• DIAGNijmegen / nnUNet-for-pathology
  Adapted nnUNet framework with additional features to suit the requirements for pathology applications
  ☆16Updated 2 months ago
• StandWisdom / Radiopathomics-pCR-nCRT
  Radiopathomics: a framework of fusing multi-scale images information to enrich description of tumor heterogeneity for LARC patients prior…
  ☆22Updated 4 years ago
• cvlab-stonybrook / local_learning_wsi
  Repository for "Gigapixel Whole-Slide Images Classification using Locally Supervised Learning" (MICCAI 2022)
  ☆28Updated 2 years ago
• hacylu / FLocK
  Code and GUI for Feature-driven Local Cell Graph (FLocK): New Computational Pathology based descriptors
  ☆16Updated 2 years ago
• smujiang / Re-stained_WSIs_Registration
  Re-stained whole slide image alignment
  ☆33Updated last year
• agentdr1 / LA_MIL
  Implementation of LA_MIL, Local Attention Graph-based Transformer for WSIs, PyTorch
  ☆24Updated last year
• xhangchen / MRAN
  Multi-Scale Representation Attention based Deep Multiple Instance Learning for Gigapixel Whole Slide Image Analysis
  ☆26Updated last year
• liupei101 / AdvMIL
  AdvMIL: Adversarial Multiple Instance Learning for the Survival Analysis on Whole-Slide Images — Medical Image Analysis 2024
  ☆35Updated last year