Alternatives and similar repositories for NucleiSegHE

Users that are interested in NucleiSegHE are comparing it to the libraries listed below

• kmboehm / orpheus
  ☆16Updated 11 months ago
• huangzhii / IMPRESS
  ☆20Updated 3 years ago
• KatherLab / cancer-metadata
  machine-readable information for the TCGA dataset, mirrored from other sources
  ☆21Updated 3 years ago
• liupei101 / GraphLSurv
  GraphLSurv: A Scalable Survival Prediction Network with Adaptive and Sparse Structure Learning for Histopathological Whole-Slide Images -…
  ☆12Updated 2 years ago
• masih4 / NuInsSeg
  NuInsSeg: A Fully Annotated Dataset for Nuclei Instance Segmentation in H&E-Stained Histological Images
  ☆40Updated last year
• javadnoorb / HistCNN
  A set of codes to classify H&E slides using deep learning
  ☆29Updated 3 years ago
• Path-AI / hif2gene
  Data and code to accompany our Nature publication
  ☆48Updated 3 years ago
• sebastianffx / stainlib
  Python 3 library for the augmentation & normalization of H&E images
  ☆64Updated 3 years ago
• cpath-ukk / lung_cancer
  ☆17Updated last year
• fmhoward / HistoXGAN
  Accurate encoding of histologic images into StyleGAN space for discovery and explainability
  ☆13Updated 4 months ago
• sinai-computational-pathology / SABenchmark
  ☆15Updated last year
• TissueImageAnalytics / PanNuke-metrics
  Evaluation code for the PanNuke dataset
  ☆29Updated 5 years ago
• AGFoersch / MultiStainDeepLearning
  Code from Foersch et al. (Under Construction / Development)
  ☆38Updated 2 years ago
• KatherLab / preProcessing
  ☆46Updated 2 years ago
• cpath-ukk / grandqc
  GrandQC tool for tissue detection and quality control in pathology
  ☆80Updated last month
• wenqi006 / SlideGraph
  ☆57Updated 4 years ago
• mostafajahanifar / awesome-dg-cpath
  Awesome Domain Generalization for Computational Pathology
  ☆23Updated last year
• markowetzlab / pathml-tutorial
  A tutorial demonstration of pathml on an example dataset for the manuscript "PathML: A unified framework for WSI analysis with deep learn…
  ☆24Updated 4 years ago
• MaryamHaghighat / PathProfiler
  Pipeline for computational pathology
  ☆37Updated 2 years ago
• okunator / Dippa
  Benchmarking of deep learning and other segmentation methods for H&E images
  ☆11Updated 2 years ago
• SarderLab / extract-xml-region
  A code for extracting annotated regions from whole slide images (WSIs) anotated in Aperio Imagescope
  ☆12Updated 5 years ago
• daangeijs / simple_wsi_viewer
  A simple web application for for viewing and navigating pathology whole-slide-images in your browser.
  ☆16Updated 2 years ago
• KatherLab / end2end-WSI-preprocessing
  End-to-end pipeline to go from raw H&E slides to normalised extracted features for training
  ☆27Updated last year
• mdsatria / MultiAttentionMIL
  ECCV-AIMIA 2022 paper: "Multi-Scale Attention-based Multiple Instance Learning for Classification of Multi-Gigapixel Histology Images"
  ☆13Updated 2 years ago
• MarvinLer / SparseConvMIL
  Sparse Convolutional Context-Aware Multiple Instance Learning for Whole Slide Image Classification | https://arxiv.org/abs/2105.02726
  ☆26Updated 4 years ago
• hms-dbmi / MOMA
  MOMA
  ☆53Updated last year
• DIAGNijmegen / pathology-he-auto-augment
  H&E tailored Randaugment: automatic data augmentation policy selection for H&E-stained histopathology.
  ☆57Updated 2 years ago
• Cassie07 / Review_Molecular_profile_prediction_GNN
  [The Lancet Digital Health, MICCAI2020 Oral] The official code of "Spatially-aware Graph Neural Networks and Cross-level Molecular Profil…
  ☆23Updated 2 years ago
• mahmoodlab / MIL-Lab
  Feather - Lightweight supervised slide foundation models (ICML 2025)
  ☆133Updated this week
• SBU-BMI / wsinfer
  🔥 🚀 Blazingly fast pipeline for patch-based classification in whole slide images
  ☆84Updated last year