Alternatives and similar repositories for sci-components:

Users that are interested in sci-components are comparing it to the libraries listed below

• chanzuckerberg / single-cell-data-portal
  The data portal supporting the submission, exploration, and management of projects and datasets to cellxgene.
  ☆65Updated this week
• HumanCellAtlas / metadata-schema
  This repo is for the metadata schemas associated with the HCA
  ☆65Updated last week
• single-cell-data / TileDB-SOMA
  Python and R SOMA APIs using TileDB’s cloud-native format. Ideal for single-cell data at any scale.
  ☆95Updated this week
• HumanCellAtlas / sctools
  Utilities for large scale distributed single cell data processing
  ☆23Updated 6 months ago
• laminlabs / bionty-base
  Access public biological ontologies.
  ☆16Updated 5 months ago
• single-cell-data / SOMA
  A flexible and extensible API for annotated 2D matrix data stored in multiple underlying formats.
  ☆73Updated last week
• DataBiosphere / terra-ui
  Web user interface for the Terra platform
  ☆53Updated this week
• kanaverse / scran.js
  Single cell analysis in Javascript
  ☆21Updated 3 months ago
• Caleydo / ordino
  Target discovery platform for exploring rankings of genes, disease models, and other entities. @JKU-ICG @datavisyn
  ☆12Updated 10 months ago
• cmap / morpheus.js
  JavaScript matrix visualization and analysis
  ☆64Updated 5 months ago
• snakemake / snakeface
  The snakemake interface, currently works like a notebook (under development)
  ☆18Updated 3 years ago
• laminlabs / nbproject
  Light-weight Jupyter notebook tracker.
  ☆33Updated last month
• EliLillyCo / pytest-wdl
  WDL plugin for pytest
  ☆48Updated last year
• 4dn-dcic / tibanna
  Tibanna helps you run your genomic pipelines on Amazon cloud (AWS). It is used by the 4DN DCIC (4D Nucleome Data Coordination and Integr…
  ☆70Updated last month
• oncojs / oncogrid
  Javascript library for visualizing OncoGrids and related tracks
  ☆26Updated 4 years ago
• HumanCellAtlas / table-testing
  requirements, examples, and tests for expression matrix file formats
  ☆22Updated 6 years ago
• bigbio / nf-workflows
  Repository of Nextflow+BioContainers workflows
  ☆14Updated 3 years ago
• genepattern / genepattern-notebook
  Platform for integrating genomic analysis with Jupyter Notebooks.
  ☆44Updated 5 months ago
• NCI-GDC / gdcdatamodel
  Translation layer between the GDC Data Dictionary and psqlgraph
  ☆28Updated 9 months ago
• HumanCellAtlas / data-consumer-vignettes
  Simple walk-throughs of interacting with the DCP as a downstream data consumer.
  ☆17Updated 3 weeks ago
• chaichontat / samui
  A performant scientific image visualization system.
  ☆34Updated this week
• broadinstitute / cromwell-tools
  A collection of Python clients and accessory scripts for interacting with the Cromwell
  ☆22Updated 2 years ago
• miniwdl-ext / miniwdl-aws
  Extends miniwdl to run workflows on AWS Batch & EFS
  ☆22Updated 11 months ago
• snakemake / snakemake-lang-vscode-plugin
  Language support and snippets for Snakemake workflows (Snakefile, *.smk) for Visual Studio Code and Apache Theia.
  ☆13Updated 3 months ago
• higlass / clodius
  Clodius is a tool for breaking up large data sets into smaller tiles that can subsequently be displayed using an appropriate viewer.
  ☆39Updated 4 months ago
• chanzuckerberg / czid-web
  Infectious Disease Sequencing Platform
  ☆82Updated 2 weeks ago
• laminlabs / lamindb
  A data framework for biology.
  ☆132Updated this week
• snakemake / snakemake-github-action
  A Github action for running a Snakemake workflow
  ☆56Updated last month
• gosling-lang / gosling-docs
  Documentations and Tutorials of Gosling.js
  ☆12Updated 3 years ago
• cancerdatasci / demeter
  Deconvolution of seed effects from gene effects in large scale RNAi screens
  ☆10Updated 6 years ago