cytomine / Cytomine-bootstrapLinks
Cytomine Community Edition Legacy
☆35Updated 2 years ago
Alternatives and similar repositories for Cytomine-bootstrap
Users that are interested in Cytomine-bootstrap are comparing it to the libraries listed below
Sorting:
- ⚡ Open-source software for deep learning-based digital pathology☆137Updated last year
- The official deployment of the Digital Slide Archive and HistomicsTK.☆127Updated this week
- Full package for applying deep learning to virtual slides.☆69Updated 7 years ago
- Python wrapper library for PMA.start, a universal viewier for whole slide imaging and microscopy☆31Updated 9 months ago
- An open-source digital pathology based rapid image annotation tool☆82Updated last month
- Delete the label from a whole-slide image☆64Updated 4 years ago
- A Girder plugin for pathology image annotations and analysis.☆74Updated last week
- Python library for converting WSI files to DICOM☆76Updated 3 weeks ago
- SlideRunner is a tool for massive cell annotations in whole slide images☆79Updated last month
- Whole Slide Digital Pathology Image Tissue Localization☆45Updated last year
- Framework for registration of sequential digitized histology slices☆28Updated 3 years ago
- Tool to visualize gigantic pathology images and use AI to segment cancer cells and present as an overlay☆73Updated 8 months ago
- Dataset: landmarks for registration of histology images☆33Updated 4 years ago
- Coincides with blogpost for using geojson and shapely☆33Updated 4 years ago
- CytoBrowser, a JavaScript and Node.js driven environment for fast and accessible collaborative online visualization, assessment, and anno…☆19Updated last month
- Digital Pathology Whole Slide Image Analysis Toolbox☆50Updated 2 years ago
- Interactive Segmentation of Nucleus☆66Updated 2 years ago
- 🔬 Code-free deep segmentation for computational pathology☆55Updated last year
- A Python module that produces image patches and annotation masks from whole slide images for deep learning in digital pathology.☆80Updated 3 years ago
- Python package for reading DICOM WSI file sets.☆44Updated last week
- A human in the loop solution to machine learning for pathologists (easy semantic segmentation of WSI)☆51Updated 5 years ago
- Cytomine-core-legacy is the main web server implementing the Cytomine API of the legacy edition☆69Updated 2 years ago
- Python package for dealing with whole slide images (.svs) for machine learning, particularly for fast prototyping. Includes patch samplin…☆163Updated last year
- WSICS☆30Updated 6 years ago
- A versatile image analysis software for biological image-based quantification using machine learning, especially for whole slide imaging.☆59Updated 4 years ago
- ☆73Updated 2 weeks ago
- Syntax - the arrangement of whole-slide-images and their image tiles to create well-formed computational pathology pipelines.☆55Updated 2 years ago
- a toolbox for manipulation of digital pathology slides and annotations☆19Updated 5 years ago
- BIRL: Benchmark on Image Registration methods with Landmark validations☆93Updated 3 years ago
- Conversion tool/library for converting whole slide images to DICOM☆84Updated 7 months ago