CogStack / MedCATservice
Running MedCAT as a RESTful web service
☆20Updated 2 weeks ago
Alternatives and similar repositories for MedCATservice:
Users that are interested in MedCATservice are comparing it to the libraries listed below
- A simple interface to inspect, improve and add concepts to biomedical NER+L -> MedCAT.☆79Updated this week
- Winners of the SNOMED CT Entity Linking Challenge☆30Updated 11 months ago
- ☆64Updated 4 years ago
- General tutorials for the setup and use of MedCAT.☆37Updated 2 months ago
- Surfacing Semantic Data from Clinical Notes in Electronic Health Records for Tailored Care, Trial Recruitment and Clinical Research☆89Updated 2 years ago
- [Under development] Assessment of Pre-trained Observational Large Language-models in OHDSI (APOLLO)☆14Updated 8 months ago
- MedTagger is a light weight clinical NLP system built upon Apache UIMA.☆64Updated 3 months ago
- A Serverless Text Annotation Tool for Corpus Development☆55Updated 3 weeks ago
- A comprehensive NLP preprocessing package for clinical notes sentence boundary detection, tokenization☆30Updated 9 months ago
- [in development] Tools to support Natural Language Processing of freetext to create structured data elements for analysis☆32Updated last year
- Public release of the DeepPhe analytic software☆30Updated 2 years ago
- Python module to parse UMLS source files☆19Updated 2 years ago
- Notebooks etc. Analysis of SNOMED-CT for the Clinical Coding Pilot and related work☆11Updated 4 years ago
- Quick script to parse out medications from discharge summaries in MIMIC format. Not that this approach uses minimal NLP, and can be vatly…☆29Updated 7 years ago
- ☆14Updated 3 months ago
- A Python Natural Language Processing Toolkit for Medical Text Generation☆76Updated 4 months ago
- A python package for removing duplicate text in clinical notes or other documents☆36Updated 4 years ago
- Code for manipulating the structure of UMLS files and converting ontologies or sets of ontologies into a graph structure.☆41Updated 4 years ago
- ☆18Updated 11 months ago
- NLP2FHIR: A FHIR-based Clinical Data Normalization Pipeline and Its Applications☆60Updated 2 years ago
- Mapping the MIMIC-III database to the OMOP schema☆132Updated 11 months ago
- A simple python library for ICD-10-CM codes☆64Updated 2 months ago
- A near real-time named-entity recognizer☆59Updated 9 months ago
- Don't worry about UMLS, RxNorm, SNOMED, or SemMedDB licensing - write code that knows how to download it automatically☆38Updated 11 months ago
- An exploratory, tutorial and analytical view of the Unified Medical Language System (UMLS) & the software/technologies provided via being…☆43Updated 11 months ago
- ☆22Updated 2 years ago
- MIMIC (Medical Information Mart for Intensive Care) is a large, single-center database comprising information relating to patients admitt…☆76Updated 3 weeks ago
- ☆52Updated 4 years ago
- Transformers for Clinical NLP☆23Updated last month
- init☆12Updated 3 months ago