IHTSDO / llm-chain-entity-extraction
☆18Updated 4 months ago
Related projects ⓘ
Alternatives and complementary repositories for llm-chain-entity-extraction
- General tutorials for the setup and use of MedCAT.☆32Updated last month
- Winners of the SNOMED CT Entity Linking Challenge☆25Updated 7 months ago
- NER and Relation Extraction from Electronic Health Records (EHR).☆83Updated 2 years ago
- Runtime repository for the SNOMED CT Entity Linking challenge on DrivenData☆14Updated 8 months ago
- An exploratory, tutorial and analytical view of the Unified Medical Language System (UMLS) & the software/technologies provided via being…☆36Updated 8 months ago
- Don't worry about UMLS, RxNorm, SNOMED, or SemMedDB licensing - write code that knows how to download it automatically☆33Updated 7 months ago
- Basic entity linker for the SNOMED EL Challenge☆13Updated 10 months ago
- ETL Tool for converting datasets to OMOP CDM☆28Updated 2 years ago
- A Python Natural Language Processing Toolkit for Medical Text Generation☆70Updated last month
- ICD-BERT: Multi-label Classification of ICD-10 Codes with BERT (CLEF 2019)☆73Updated last year
- A simple interface to inspect, improve and add concepts to biomedical NER+L -> MedCAT.☆72Updated this week
- PLM-ICD: Automatic ICD Coding with Pretrained Language Models☆56Updated last year
- The project was to build and release the first publicly available code evidence dataset called MDACE on a subset of the MIMIC-III clinica…☆24Updated last year
- Surfacing Semantic Data from Clinical Notes in Electronic Health Records for Tailored Care, Trial Recruitment and Clinical Research☆89Updated last year
- Large Language Models to Identify Social Determinants of Health in Electronic Health Records | Paper: https://www.nature.com/articles/s41…☆40Updated 10 months ago
- Python Radiology Text Analysis System☆13Updated last year
- ☆12Updated 6 years ago
- ☆63Updated 3 years ago
- NLP2FHIR: A FHIR-based Clinical Data Normalization Pipeline and Its Applications☆59Updated 2 years ago
- ☆21Updated last year
- An ETL pipeline to transform your EMP data to OMOP.☆11Updated 2 weeks ago
- A comprehensive NLP preprocessing package for clinical notes sentence boundary detection, tokenization☆29Updated 6 months ago
- Clinical text summarization by adapting large language models☆120Updated 3 months ago
- Estimate similarity of medical concepts based on Unified Medical Language System (UMLS)☆16Updated 2 years ago
- ☆28Updated 3 years ago
- FHIR to pandas dataframe for data analytics, AI and ML!☆33Updated this week
- Language model for cancer domain☆13Updated 2 years ago
- FHIR Ontop OMOP Implementation☆16Updated 6 months ago
- This demonstration showcases potential applications of artificial intelligence (AI) in the implementation of SNOMED CT☆11Updated last month
- PMC-Patients☆83Updated 5 months ago