IHTSDO / llm-chain-entity-extractionLinks
☆26Updated 3 months ago
Alternatives and similar repositories for llm-chain-entity-extraction
Users that are interested in llm-chain-entity-extraction are comparing it to the libraries listed below
Sorting:
- Winners of the SNOMED CT Entity Linking Challenge☆41Updated last year
- An exploratory, tutorial and analytical view of the Unified Medical Language System (UMLS) & the software/technologies provided via being…☆44Updated last year
- General tutorials for the setup and use of MedCAT.☆40Updated 4 months ago
- Don't worry about UMLS, RxNorm, SNOMED, or SemMedDB licensing - write code that knows how to download it automatically☆40Updated last year
- A simple interface to inspect, improve and add concepts to biomedical NER+L -> MedCAT.☆85Updated last month
- Work on using Retrieval-Augmented Generation (RAG) to combine Fast Healthcare Interoperable Resources (FHIR) with Generative AI.☆109Updated last year
- Estimate similarity of medical concepts based on Unified Medical Language System (UMLS)☆16Updated 3 years ago
- Runtime repository for the SNOMED CT Entity Linking challenge on DrivenData☆14Updated last year
- FHIR Ontop OMOP Implementation☆20Updated last year
- Robust de-identification of medical notes using transformer architectures☆54Updated 3 years ago
- A deidentifier / deidentification pipeline developed by Stanford and Penn as part of the MIDRC organization.☆89Updated last year
- UMLS to SNOMED CT and ICD-10 mapping tool: A Python script for generating JSON files containing mappings between UMLS CUIs and SNOMED CT …☆14Updated 2 years ago
- Common clinical models in the forms of openEHR archetypes and GDL guidelines☆37Updated this week
- A Python Natural Language Processing Toolkit for Medical Text Generation☆83Updated 4 months ago
- MedTagger is a light weight clinical NLP system built upon Apache UIMA.☆69Updated 5 months ago
- Apache cTAKES is a Natural Language Processing (NLP) platform for clinical text.☆103Updated last week
- Representation of Clinical Practice Guideline Recommendations in FHIR☆18Updated 4 months ago
- python library for graphical and continuous representations of ICD9 and ICD10 codes☆41Updated 8 months ago
- LLM Embeddings for ICD 10 Data☆54Updated 9 months ago
- A comprehensive NLP preprocessing package for clinical notes sentence boundary detection, tokenization☆32Updated last year
- Surfacing Semantic Data from Clinical Notes in Electronic Health Records for Tailored Care, Trial Recruitment and Clinical Research☆89Updated 2 years ago
- A Python library to de-identify medical records with state-of-the-art NLP methods.☆141Updated last year
- Clinical text summarization by adapting large language models☆149Updated last year
- Python package for managing OHDSI clinical data models. Includes support for LLM based plain text queries, MCP server and FHIR import.☆51Updated last week
- ☆18Updated 4 years ago
- A Python Natural Language Processing Toolkit for Electronic Health Record Texts☆13Updated 2 years ago
- Transformers for Clinical NLP☆25Updated 2 months ago
- ☆12Updated 7 years ago
- ☆24Updated last year
- UMLS Graph database for semantic queries☆23Updated 2 years ago