☆23May 16, 2026Updated this week
Alternatives and similar repositories for kg-microbe
Users that are interested in kg-microbe are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- A package to transform all OBO ontologies into KGX TSV format and OBO json, and put the transformed graph in KGhub☆33Mar 19, 2024Updated 2 years ago
- ☆15Updated this week
- 🍇 Embiggen is the Python Graph Representation learning, Prediction and Evaluation submodule of the GRAPE library.☆44Jan 8, 2026Updated 4 months ago
- LLM-based gene function enrichment tool☆18Feb 19, 2025Updated last year
- Ontology for representing scientific evidence and provenance information☆53Oct 2, 2025Updated 7 months ago
- Serverless GPU API endpoints on Runpod - Get Bonus Credits • AdSkip the infrastructure headaches. Auto-scaling, pay-as-you-go, no-ops approach lets you focus on innovating your application.
- Tools for working with KGCL☆20Nov 19, 2024Updated last year
- Network Embedding All the Things☆19Oct 4, 2022Updated 3 years ago
- 🐸 Idiomatic conversion between URIs and compact URIs (CURIEs) in Python☆27May 7, 2026Updated 2 weeks ago
- An instance of KG Hub to produce a knowledge graph for COVID-19 response.☆84Aug 3, 2023Updated 2 years ago
- A collection of useful python functions for looking up information and working with the Biolink Model☆24May 11, 2026Updated last week
- ☆12Jan 16, 2025Updated last year
- SQL and SQLite builds of OWL ontologies☆61May 11, 2026Updated last week
- Tools and specifications for Semantic Data Dictionaries☆12Apr 3, 2026Updated last month
- Integrated OBO ontology store☆49Feb 13, 2026Updated 3 months ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- ☆21Apr 29, 2026Updated 3 weeks ago
- NP-KG: Knowledge Graph Framework for Natural Product-Drug Interactions☆19Jun 25, 2024Updated last year
- Python toolkit for SSSOM mapping format☆62May 13, 2026Updated last week
- Ontology Access Kit: A python library and command line application for working with ontologies☆168May 12, 2026Updated last week
- ☆24Nov 30, 2020Updated 5 years ago
- This is the development repository for the STATistics Ontology (STATO). For more information and demonstration on the ontology content, p…☆39Apr 20, 2026Updated last month
- python library for working with ontologies and ontology associations☆133Feb 11, 2025Updated last year
- Modular environmental exposures ontology☆38May 4, 2026Updated 2 weeks ago
- KGX is a Python library for exchanging Knowledge Graphs☆140Updated this week
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- Semantic prefix map registry☆14May 9, 2026Updated last week
- Analyses in R and Python Using curatedMetagenomicData☆38Nov 16, 2025Updated 6 months ago
- Collation of metadata examples and notes for the project☆12Apr 16, 2026Updated last month
- Babel creates cliques of equivalent identifiers across many biomedical vocabularies.☆14May 13, 2026Updated last week
- Schema and generated objects for biolink data model and upper ontology☆240Updated this week
- Code for classifying unstructured text to tissue ontology terms using natural language processing and machine learning.☆28Aug 21, 2024Updated last year
- 📮 An integrative registry of biological databases, ontologies, and nomenclatures.☆143May 14, 2026Updated last week
- pretrained LookingGlass language model for biological read-length DNA sequences, and related models derived from transfer learning☆17Feb 19, 2026Updated 3 months ago
- GPRuler, an open-source computational framework to automate the reconstruction process of Gene-Protein-Reaction (GPR) rules within metabo…☆12Oct 11, 2022Updated 3 years ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- Data transformation framework for LinkML data models☆64May 15, 2026Updated last week
- EBIC - AI-based parallel biclustering algorithm☆21Sep 25, 2018Updated 7 years ago
- ☆78Dec 20, 2023Updated 2 years ago
- First pass at a thin wrapper around the Monarch API and ChatGPT plugin☆12Mar 21, 2025Updated last year
- Transforming SemRep Predications into an Open Biomedical Linked Data Resource☆11Jan 26, 2018Updated 8 years ago
- Evidence & Conclusion Ontology development site: Use ISSUES to request terms. See WIKI for how to request terms. See README for how to c…☆52Updated this week
- Using MASST or fastMASST, adding metadata onto a tree ontology for microbes☆25Apr 15, 2026Updated last month