ā26Aug 30, 2026Updated this week
Alternatives and similar repositories for kg-microbe
Users that are interested in kg-microbe are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- A package to transform all OBO ontologies into KGX TSV format and OBO json, and put the transformed graph in KGhubā34Mar 19, 2024Updated 2 years ago
- š Embiggen is the Python Graph Representation learning, Prediction and Evaluation submodule of the GRAPE library.ā44Jan 8, 2026Updated 7 months ago
- A registry of Knowledge Graphs, their data sources, and the ways they fit together.ā27Aug 17, 2026Updated last week
- A copier template for your next LinkML projectā26Aug 1, 2026Updated 3 weeks ago
- Tools for working with KGCLā20Nov 19, 2024Updated last year
- Deploy to Railway using AI coding agents - Free Credits Offer ⢠AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- Common value sets (enums) for science, biomedicine, computing, and other areasā15Aug 18, 2026Updated last week
- ā15Aug 10, 2026Updated 2 weeks ago
- LLM-based gene function enrichment toolā18Feb 19, 2025Updated last year
- Ontology for representing scientific evidence and provenance informationā52Oct 2, 2025Updated 10 months ago
- Disease Mechanisms KBā56Updated this week
- An ontology of core ecological entitiesā17Aug 17, 2026Updated last week
- KGX is a Python library for exchanging Knowledge Graphsā185Aug 20, 2026Updated last week
- Semantic prefix map registryā14Jul 2, 2026Updated last month
- Collation of metadata examples and notes for the projectā12Apr 16, 2026Updated 4 months ago
- End-to-end encrypted cloud storage - Proton Drive ⢠AdSpecial offer: 40% Off Yearly / 80% Off First Month. Protect your most important files, photos, and documents from prying eyes.
- Bayesian OWL ontology mergingā37Jun 4, 2025Updated last year
- Network Embedding All the Thingsā19Oct 4, 2022Updated 3 years ago
- First pass at a thin wrapper around the Monarch API and ChatGPT pluginā12Mar 21, 2025Updated last year
- Ontology Access Kit: A python library and command line application for working with ontologiesā195Aug 21, 2026Updated last week
- DEPRECATED: replaced by linkmlā24Apr 4, 2021Updated 5 years ago
- Enumerating biosynthetic pathways in metabolic networksā13Feb 5, 2025Updated last year
- Python toolkit for SSSOM mapping formatā64Updated this week
- Schema and generated objects for biolink data model and upper ontologyā260Updated this week
- An instance of KG Hub to produce a knowledge graph for COVID-19 response.ā84Aug 3, 2023Updated 3 years ago
- AI Agents on DigitalOcean Gradient AI Platform ⢠AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- š® An integrative registry of biological databases, ontologies, and nomenclatures.ā149Updated this week
- Babel creates cliques of equivalent identifiers across many biomedical vocabularies.ā17Updated this week
- A collection of useful python functions for looking up information and working with the Biolink Modelā26Aug 11, 2026Updated 2 weeks ago
- Repository for representing genotypes and their association with phenotypesā20Feb 2, 2026Updated 6 months ago
- Registry of schemas that use LinkMLā19Jul 27, 2026Updated last month
- PanGenomePipelineā16Apr 10, 2024Updated 2 years ago
- python library for working with ontologies and ontology associationsā133Feb 11, 2025Updated last year
- Standardized identifiers and OWL classes for chromosomes and chromosomal parts across speciesā15May 19, 2026Updated 3 months ago
- Automated assistance for the schema development lifecycleā66Updated this week
- Managed hosting for WordPress and PHP on Cloudways ⢠AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- Draft cell type definitions from data - candidates for inclusion in CLā12Jul 8, 2025Updated last year
- SQL and SQLite builds of OWL ontologiesā69Aug 19, 2026Updated last week
- A cookiecutter for linkml projects. An equivalent of `linkml-ws new project-name`.ā26Oct 23, 2025Updated 10 months ago
- Collection of tutorials to build RNA-KG v2.0 from scratch and for reproducing experiments such as "context-aware" KG pruning, clustering,ā¦ā29Aug 7, 2026Updated 3 weeks ago
- LLM-driven curation assist toolā118Oct 20, 2025Updated 10 months ago
- Evidence & Conclusion Ontology development site: Use ISSUES to request terms. See WIKI for how to request terms. See README for how to cā¦ā54Jul 10, 2026Updated last month
- CRDC-H model in LinkML, developed by the Center for Cancer Data Harmonization (CCDH)ā18Jan 7, 2022Updated 4 years ago