โ25Jul 21, 2026Updated this week
Alternatives and similar repositories for kg-microbe
Users that are interested in kg-microbe are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- A package to transform all OBO ontologies into KGX TSV format and OBO json, and put the transformed graph in KGhubโ34Mar 19, 2024Updated 2 years ago
- ๐ Embiggen is the Python Graph Representation learning, Prediction and Evaluation submodule of the GRAPE library.โ44Jan 8, 2026Updated 6 months ago
- A registry of Knowledge Graphs, their data sources, and the ways they fit together.โ27Updated this week
- LLM-based gene function enrichment toolโ17Feb 19, 2025Updated last year
- A copier template for your next LinkML projectโ22Updated this week
- Deploy to Railway using AI coding agents - Free Credits Offer โข AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- Tools for working with KGCLโ20Nov 19, 2024Updated last year
- Common value sets (enums) for science, biomedicine, computing, and other areasโ15Jul 1, 2026Updated 2 weeks ago
- โ15May 21, 2026Updated 2 months ago
- Ontology for representing scientific evidence and provenance informationโ51Oct 2, 2025Updated 9 months ago
- Disease Mechanisms KBโ35Updated this week
- An ontology of core ecological entitiesโ17Dec 14, 2023Updated 2 years ago
- KGX is a Python library for exchanging Knowledge Graphsโ183Updated this week
- Semantic prefix map registryโ14Jul 2, 2026Updated 2 weeks ago
- Collation of metadata examples and notes for the projectโ12Apr 16, 2026Updated 3 months ago
- Managed hosting for WordPress and PHP on Cloudways โข AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- A knowledge extraction tool that uses a large language model to extract semantic information from textโ31Jan 3, 2023Updated 3 years ago
- Bayesian OWL ontology mergingโ36Jun 4, 2025Updated last year
- Network Embedding All the Thingsโ19Oct 4, 2022Updated 3 years ago
- First pass at a thin wrapper around the Monarch API and ChatGPT pluginโ12Mar 21, 2025Updated last year
- Ontology Access Kit: A python library and command line application for working with ontologiesโ183Updated this week
- DEPRECATED: replaced by linkmlโ24Apr 4, 2021Updated 5 years ago
- Mapping between LinkML schemasโ41Updated this week
- Python toolkit for SSSOM mapping formatโ62Updated this week
- Schema and generated objects for biolink data model and upper ontologyโ254Updated this week
- GPUs on demand by Runpod - Special Offer Available โข AdRun AI, ML, and HPC workloads on powerful cloud GPUsโwithout limits or wasted spend. Deploy GPUs in under a minute and pay by the second.
- An instance of KG Hub to produce a knowledge graph for COVID-19 response.โ83Aug 3, 2023Updated 2 years ago
- ๐ฎ An integrative registry of biological databases, ontologies, and nomenclatures.โ145Updated this week
- Babel creates cliques of equivalent identifiers across many biomedical vocabularies.โ17Updated this week
- A collection of useful python functions for looking up information and working with the Biolink Modelโ25Updated this week
- โ15Apr 15, 2026Updated 3 months ago
- Repository for representing genotypes and their association with phenotypesโ19Feb 2, 2026Updated 5 months ago
- PanGenomePipelineโ16Apr 10, 2024Updated 2 years ago
- python library for working with ontologies and ontology associationsโ133Feb 11, 2025Updated last year
- Standardized identifiers and OWL classes for chromosomes and chromosomal parts across speciesโ14May 19, 2026Updated 2 months ago
- Managed hosting for WordPress and PHP on Cloudways โข AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- Automated assistance for the schema development lifecycleโ60Updated this week
- Draft cell type definitions from data - candidates for inclusion in CLโ12Jul 8, 2025Updated last year
- SQL and SQLite builds of OWL ontologiesโ67Jul 14, 2026Updated last week
- A cookiecutter for linkml projects. An equivalent of `linkml-ws new project-name`.โ26Oct 23, 2025Updated 8 months ago
- Collection of tutorials to build RNA-KG v2.0 from scratch and for reproducing experiments such as "context-aware" KG pruning, clustering,โฆโ29Mar 16, 2026Updated 4 months ago
- LLM-driven curation assist toolโ115Oct 20, 2025Updated 9 months ago
- โ12Jan 16, 2025Updated last year