Simple template for running snakemake with R
☆12Jan 31, 2023Updated 3 years ago
Alternatives and similar repositories for snakemake-with-R
Users that are interested in snakemake-with-R are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Probabilistic deep learning using JAX☆15Feb 8, 2025Updated last year
- ☆14Jun 24, 2024Updated last year
- Inference in Bayesian Networks with R☆12Feb 6, 2023Updated 3 years ago
- Next Generation Genomic Prediction Tools☆10Apr 23, 2026Updated last week
- Map single-cell transcriptomes to copy number evolutionary trees.☆14Aug 18, 2024Updated last year
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- The configurations, scripts etc. used to set up my homelab☆15Feb 22, 2026Updated 2 months ago
- cell type specific, trait-associated gene regulation☆29Mar 31, 2025Updated last year
- Vector Approximate Message Passing inference framework for GWAS☆19Jan 14, 2026Updated 3 months ago
- Multi-origin batch effect remover method☆19Jan 31, 2023Updated 3 years ago
- 16S pipeline using qiime2 created with snakemake☆12Apr 9, 2026Updated 3 weeks ago
- VILOCA: VIral LOcal haplotype reconstruction and mutation CAlling for short and long read data☆23Oct 21, 2025Updated 6 months ago
- A collection of papers about package management we can all ready!☆11May 15, 2019Updated 6 years ago
- Find out if your SSH keys are safe!☆12Oct 18, 2024Updated last year
- coding exercise using TCGA immune infiltration data☆11Feb 2, 2024Updated 2 years ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- Template repository for build Standalone R Shiny application with Electron☆18Nov 15, 2024Updated last year
- Pair-wise conditional analysis and colocalisation☆42May 2, 2024Updated last year
- Metabolic scanning and annotation of Metagenomes☆10Dec 18, 2025Updated 4 months ago
- An R-Package to Visualize the (Causal) Effect of a Continuous Variable on a Time-To-Event Outcome☆16Jan 29, 2026Updated 3 months ago
- kMetaShot is an alignment-free taxonomic classifier based on k-mer/minimizer counting for MAGs☆11Mar 20, 2026Updated last month
- annotating microbial co-occurrence networks☆12Oct 7, 2025Updated 6 months ago
- A fork of al-folio with my custom stylistic modifications. This is the theme that I use for my personal website.☆15Jan 28, 2026Updated 3 months ago
- A project to develop the R Shiny applications.☆12May 13, 2019Updated 6 years ago
- Pipeline for genetic epidemiology projects at Univsersity of Bristol☆15Updated this week
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- ☆10Nov 24, 2025Updated 5 months ago
- EIDF Services Documentation☆20Apr 21, 2026Updated last week
- Code for GBMI trans-ancestry proteome Mendelian randomization satellite paper☆18Dec 25, 2023Updated 2 years ago
- Magick Helper☆18Dec 2, 2022Updated 3 years ago
- shifts hg19/38 genomic position for feasible input format.☆12Jun 8, 2023Updated 2 years ago
- Snakemake template for building reusable and scalable machine learning pipelines with mikropml☆13Feb 26, 2025Updated last year
- Analyses pipelines that I use for my work☆12Jul 7, 2021Updated 4 years ago
- Boiler: a software tool for highly efficient, lossy compression of RNA-seq alignments☆13Jul 14, 2016Updated 9 years ago
- Basic and model-based soil physical analyses☆13Jul 30, 2022Updated 3 years ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- Gennome annotation scripts for the crickets Gryllus bimaculatus and Laupala kohalensis.☆13Feb 28, 2022Updated 4 years ago
- A "git trac" subcommand for git☆13Apr 6, 2022Updated 4 years ago
- Script to help assessing the evolutionary history of a TE family☆16Sep 5, 2019Updated 6 years ago
- small scripts, functions or bits of code for parsing genomic data☆14Sep 24, 2022Updated 3 years ago
- Repel Visually Similar Colors for Colorblind Users (CRAN)☆10Jul 21, 2025Updated 9 months ago
- ☆16Apr 29, 2024Updated 2 years ago
- Map between IETF language tags and OpenType language system tags☆12Aug 20, 2020Updated 5 years ago