Alternatives and similar repositories for bnpsd

Users that are interested in bnpsd are comparing it to the libraries listed below

• genomematt / xenomapper
  A utility for splitting mixed origin NGS reads
  ☆10Updated 4 years ago
• NovembreLab / PCAviz
  An R package to help in plotting PCA results nicely.
  ☆13Updated 5 years ago
• StoreyLab / popkin
  R package to estimate kinship and FST from SNP data
  ☆21Updated 9 months ago
• msesia / knockoffgwas
  A flexible tool for the multi-resolution localization of causal variants across the genome, accounting for population structure.
  ☆15Updated 3 years ago
• ngs-docs / 2015-nov-adv-rna
  ☆18Updated 9 years ago
• dorolin / rearrvisr
  An R package to detect, classify, and visualize genome rearrangements
  ☆14Updated 4 years ago
• mturchin20 / bmass
  R package for 'Bayesian multivariate analysis of summary statistics' (Stephens Lab)
  ☆10Updated 4 years ago
• popgenmethods / ldpop
  Two locus likelihoods and ARGs under changing population size
  ☆14Updated 3 months ago
• rohan-shah / mpMap2
  New version of mpMap
  ☆12Updated 5 years ago
• liamrevell / learnPopGen
  initial commit
  ☆26Updated 2 years ago
• williamslab / ibis
  Algorithm for rapid, phase-free detection of long identical by descent segments
  ☆20Updated last year
• dcjones / isolator
  Rapid and robust analysis of RNA-Seq experiments.
  ☆32Updated 9 years ago
• stephenslab / effective-computing
  Effective Computing—Resources for Computational Biologists
  ☆26Updated 5 years ago
• QTCAT / qtcat
  Quantitative Trait Cluster Association Test in R
  ☆25Updated 4 years ago
• koelling / dnacol
  Color DNA/RNA bases in terminal output
  ☆21Updated 7 years ago
• weissmanlab / magic
  Minimal Assumption Genomic Inference of Coalescence
  ☆14Updated last year
• lamortenera / bamsignals
  R package to quickly obtain count vectors from indexed bam files
  ☆15Updated last month
• pachterlab / kallisto-sleuth-workshop-2016
  materials and website for the 2016 kallisto sleuth workshop
  ☆11Updated 8 years ago
• statgen / savvy
  Interface to various variant calling formats.
  ☆30Updated last year
• kkdey / Logolas
  R package for Enrichment Depletion Logos (EDLogos) and String Logos
  ☆27Updated 6 years ago
• zhengxwen / SeqArray
  Data management of large-scale whole-genome sequence variant calls using GDS files (Development version only)
  ☆45Updated last week
• rqtl / qtl2
  QTL analysis software for high-dimensional data and complex cross designs
  ☆34Updated last month
• COMBINE-lab / shoal
  Improved multi-sample transcript abundance estimates using adaptive priors
  ☆20Updated 6 years ago
• xa6xa6 / metaOthello
  ☆16Updated 7 years ago
• bobverity / MavericK
  Source code for the program MavericK, described fully at www.bobverity.com/maverick
  ☆12Updated 7 years ago
• roblanf / minion_multiQC
  multi-tool QC for minion data
  ☆9Updated 7 years ago
• mreppell / Karp
  Accurate and fast taxonomic classification using pseudoaligning
  ☆21Updated 7 years ago
• AgResearch / KGD
  Kinship (genetic relatedness) using GBS (genotyping-by-sequencing) with Depth adjustment
  ☆21Updated last month
• lkuchenb / imseq
  IMSEQ - IMmunogenetic SEQuence Analysis
  ☆15Updated 6 years ago
• vsbuffalo / gplyr
  ☆18Updated 8 years ago