Analysis with Profile Hidden Markov Models
☆22Jan 23, 2026Updated 4 months ago
Alternatives and similar repositories for aphid
Users that are interested in aphid are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- K-mer Counting for Biological Sequence Analysis☆29Jan 23, 2026Updated 4 months ago
- Dendrograms for Evolutionary Analysis☆12Dec 9, 2019Updated 6 years ago
- SymPortal is an analytical tool used to identify Symbiodiniaceae genotypes using Illumina rDNA ITS2 amplicon NGS data.☆21Feb 12, 2024Updated 2 years ago
- Extremely accurate algorithm used to group DNA sequences from microbial communities into operational taxonomic units (proxy for species) …☆14Nov 20, 2018Updated 7 years ago
- The Environmental Genomic Group also does lab work. This is how we do it.☆12Jul 4, 2019Updated 6 years ago
- Managed Database hosting by DigitalOcean • AdPostgreSQL, MySQL, MongoDB, Kafka, Valkey, and OpenSearch available. Automatically scale up storage and focus on building your apps.
- Polygenic score calculation from VCF in Nim.☆15Nov 22, 2020Updated 5 years ago
- Cheat Sheets for mlr3 and Friends☆11Updated this week
- taxonomy R packages☆44Apr 16, 2024Updated 2 years ago
- ☆26Sep 18, 2025Updated 8 months ago
- Deblur is a greedy deconvolution algorithm based on known read error profiles.☆99Mar 8, 2025Updated last year
- An automated pipeline for retrieving orthologous DNA sequences from GenBank in R☆25Mar 20, 2026Updated 2 months ago
- PRS-on-SPARK☆18Feb 4, 2021Updated 5 years ago
- This repo contains the code for a shiny app that allows for visualization of subset phylogenetic trees☆15Jan 9, 2019Updated 7 years ago
- RStudio addin to paste last value as comment in code☆11May 24, 2021Updated 5 years ago
- Managed Database hosting by DigitalOcean • AdPostgreSQL, MySQL, MongoDB, Kafka, Valkey, and OpenSearch available. Automatically scale up storage and focus on building your apps.
- ☆19Dec 7, 2020Updated 5 years ago
- Dot2dot: Accurate Whole-Genome Tandem Repeats Discovery☆11Oct 5, 2022Updated 3 years ago
- Code that I make for my posts☆13Nov 1, 2022Updated 3 years ago
- Create your own PanViz visualizations☆21Nov 20, 2017Updated 8 years ago
- JAMP - Just Another Metabarcoding Pipeline☆39Jan 7, 2022Updated 4 years ago
- DarkHorse2 source code☆11May 3, 2022Updated 4 years ago
- ☆19May 13, 2026Updated 2 weeks ago
- R Interfaces to Phylogenetic Software☆12Mar 24, 2026Updated 2 months ago
- Simple and crude scripts that I've written for my own work that may be of help to others with similar tasks☆13Jun 16, 2020Updated 5 years ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- An easy way of MLSTyping your genomes in R.☆19Dec 21, 2020Updated 5 years ago
- Fast hierarchical medoid clustering☆16Apr 24, 2019Updated 7 years ago
- Correction of palindromes in long reads from PacBio and Nanopore☆14Mar 1, 2022Updated 4 years ago
- Persist attributes through data manipulations☆22Mar 17, 2020Updated 6 years ago
- Distance denoise by Entropy☆15Oct 17, 2025Updated 7 months ago
- Draggable regression points in R Shiny☆21Jun 15, 2020Updated 5 years ago
- Run Length Encoded vectors for julia, inspired by BioConductor.☆19Jan 13, 2024Updated 2 years ago
- Python programming workshop for bioinformatics☆10Jul 13, 2021Updated 4 years ago
- Foundation of vector-like and list-like containers in Bioconductor☆18May 16, 2026Updated last week
- End-to-end encrypted cloud storage - Proton Drive • AdSpecial offer: 40% Off Yearly / 80% Off First Month. Protect your most important files, photos, and documents from prying eyes.
- Python module to read binary Plink files.☆17Mar 25, 2026Updated 2 months ago
- ☆14Jul 12, 2022Updated 3 years ago
- NRPSpredictor2 is a program to predict the specificity of bacterial and fungal adenylation domains.☆11Oct 7, 2019Updated 6 years ago
- FREE Divergence Error-Correcting DNA Barcodes☆10Jun 23, 2018Updated 7 years ago
- GPU accelerated GWAS framework based on TensorFlow☆33Jul 6, 2023Updated 2 years ago
- A jupyter notebook tutorial for making high-quality barplot figures from population structure analyses (Admixture, Structure) with Python…☆16Apr 17, 2025Updated last year
- MetNormalizer is used to normalize large scale metabolomics data.☆22Mar 3, 2021Updated 5 years ago