Alternatives and similar repositories for aphid

Users that are interested in aphid are comparing it to the libraries listed below

• shaunpwilkinson / kmer
  K-mer Counting for Biological Sequence Analysis
  ☆27Updated 6 years ago
• fkeck / bioseq
  A Toolbox for Manipulating Biological Sequences in R
  ☆23Updated 2 years ago
• joey711 / shiny-phyloseq
  An interactive web application for demonstrating and using phyloseq.
  ☆60Updated 6 years ago
• YuLab-SMU / tidytree
  A Tidy Tool for Phylogenetic Tree Data Manipulation
  ☆56Updated last year
• drostlab / metablastr
  Seamless Integration of BLAST Sequence Searches in R
  ☆31Updated last year
• statdivlab / tinyvamp
  ☆19Updated 2 years ago
• statdivlab / corncob
  Count Regression for Correlated Observations with the Beta-binomial
  ☆106Updated 4 months ago
• tbradley1013 / tree-subset-shiny
  This repo contains the code for a shiny app that allows for visualization of subset phylogenetic trees
  ☆15Updated 6 years ago
• csoneson / treeclimbR
  ☆20Updated 3 weeks ago
• gmbecker / genbankr
  ☆20Updated last year
• kassambara / fastqcr
  fastqcr: Quality Control of Sequencing Data
  ☆74Updated 2 years ago
• SchlossLab / mikropml
  User-Friendly R Package for Supervised Machine Learning Pipelines
  ☆59Updated last week
• fawda123 / ggord
  a take on ordination plots using ggplot2
  ☆65Updated last year
• rnabioco / valr
  Genome Interval Arithmetic in R
  ☆93Updated this week
• tpq / propr
  [OFFICIAL] [CoDA] An R package to calculate proportionality and other measures for compositional data
  ☆71Updated last month
• emmanuelparadis / ape
  Analysis of Phylogenetics and Evolution
  ☆70Updated 2 months ago
• Bioconductor / Biostrings
  Efficient manipulation of biological strings
  ☆65Updated last month
• heike / gglogo
  R package for creating sequence logo plots
  ☆22Updated last year
• ChrisLou-bioinfo / gg.gap
  Easy to define segments in y-axis for 'ggplot2'.
  ☆28Updated 5 years ago
• federicomarini / pcaExplorer
  pcaExplorer - Interactive exploration of Principal Components of Samples and Genes in RNA-seq data
  ☆56Updated 3 months ago
• gschofl / reutils
  Talk to the NCBI EUtils
  ☆22Updated 4 years ago
• mblstamps / stamps2018
  STAMPS 2018 course
  ☆15Updated 7 years ago
• zhanxw / seqminer
  Query sequence data (VCF/BCF1/BCF2, Tabix, BGEN, PLINK) in R
  ☆30Updated 10 months ago
• spholmes / F1000_workflow
  ☆43Updated 8 years ago
• YuLab-SMU / ggtreeExtra
  Add Geom Layers On Circular Or Other Layout Tree Of “ggtree”
  ☆94Updated last month
• PennChopMicrobiomeProgram / ZIBR
  Zero-Inflated Beta Random Effect model
  ☆30Updated last year
• ropensci / babette
  babette is an R package to work with BEAST2
  ☆46Updated this week
• jennahamlin / tinselR
  An Amazing Shiny App
  ☆17Updated 3 years ago
• YuLab-SMU / treeio
  Base Classes and Functions for Phylogenetic Tree Input and Output
  ☆103Updated 3 months ago
• vallenderlab / MicrobiomeR
  A comprehensive and customizable R package for microbiome analysis.
  ☆23Updated 2 months ago