Example workflows for the Makeflow workflow system.
☆34Feb 24, 2025Updated last year
Alternatives and similar repositories for makeflow-examples
Users that are interested in makeflow-examples are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Build and submit workflows to HTCondor in Python☆26Mar 2, 2026Updated 2 months ago
- **PLEASE NOTE: Due to lack of funding Leaf LIMS is no longer being developed/updated**. The API backend for Leaf LIMS☆13Jun 10, 2021Updated 4 years ago
- novoBreak: local assembly for breakpoint detection in cancer genomes☆25May 2, 2018Updated 8 years ago
- Listing of GPU based bioinformatics software & sites & publications☆12Jan 16, 2022Updated 4 years ago
- Easy deployment of docker containers over ssh☆11Jul 6, 2015Updated 10 years ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- Ebola virus surveillance☆15Aug 28, 2016Updated 9 years ago
- RNA mapping pipeline☆18Jun 3, 2018Updated 7 years ago
- Snakemake skeleton - Build workflows with Snakemake☆19May 17, 2024Updated 2 years ago
- Making Snakemake workflows into full-fledged command line tools since 1999.☆51Apr 19, 2018Updated 8 years ago
- ☆10Oct 6, 2020Updated 5 years ago
- A pipelining tool to automate and standardise bioinformatics analyses on cluster environments.☆99Apr 9, 2023Updated 3 years ago
- ControverSciences est un portail collaboratif qui rassemble les publications scientifiques autour de questions controversées, en les ren…☆16May 8, 2025Updated last year
- An R package implementing an idiosyncratic Stan workflow☆15Aug 18, 2022Updated 3 years ago
- Small(-ish) datasets for fun and teaching☆17Apr 5, 2016Updated 10 years ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- ☆22Jun 30, 2020Updated 5 years ago
- 🍶 Genome assembly with short sequence reads☆25Mar 10, 2026Updated 2 months ago
- Fast & accurate alignment of barcoded short-reads☆32Jun 29, 2023Updated 2 years ago
- ☆15Oct 9, 2025Updated 7 months ago
- Convert your single-cell/spatial analyses to parallel HPC/cloud workflows just using pipes in R☆18May 14, 2026Updated last week
- ☆11Jan 5, 2022Updated 4 years ago
- Reproducible pipeline for "Comprehensive evaluation of cell-type quantification methods for immuno-oncology", Sturm et al. 2019, https://…☆44Jul 6, 2020Updated 5 years ago
- waka waka☆18Mar 18, 2021Updated 5 years ago
- The blog of tidyomics☆13Jul 12, 2025Updated 10 months ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- ☆18Jan 24, 2018Updated 8 years ago
- Ecological mixed-effects ordination with lme4☆12May 9, 2016Updated 10 years ago
- Bioinformatics curated workflows that use Biocontainers tools☆19Jun 11, 2019Updated 6 years ago
- My computational biology course as it evolves in real time☆14Aug 31, 2021Updated 4 years ago
- ☆10May 17, 2017Updated 9 years ago
- An implementation of a neural network training routine using derivative information in Pytorch.☆11Dec 19, 2020Updated 5 years ago
- ☆18Oct 17, 2023Updated 2 years ago
- Base-pair resolution detection of transcription factor binding site by deep deconvolutional network☆10Sep 12, 2017Updated 8 years ago
- cnv-seq with custom bugfix☆10Mar 23, 2013Updated 13 years ago
- Managed Database hosting by DigitalOcean • AdPostgreSQL, MySQL, MongoDB, Kafka, Valkey, and OpenSearch available. Automatically scale up storage and focus on building your apps.
- ☆14Sep 7, 2023Updated 2 years ago
- An R package containing helper functions for Stan☆17Dec 13, 2021Updated 4 years ago
- NRPyPN: Validated Post-Newtonian Expressions for Numerical Relativity☆12Oct 1, 2023Updated 2 years ago
- Finding the conditional distributions of a Gaussian Mixture Model☆13Nov 10, 2019Updated 6 years ago
- Minimum Bait Cover Toolkit Syotti.☆15Jan 22, 2025Updated last year
- MarkupPy - An HTML/XML generator☆11May 11, 2026Updated last week
- ☆10Apr 10, 2016Updated 10 years ago