bicycle1885 / CellFishing.jl

Related projects: ⓘ

• tlnagy / FCSFiles.jl
  🧫 Read Flow Cytometry Standard (FCS) files in Julia
  ☆17Updated last year
• dcjones / polee
  Analyzing RNA-Seq with approximate likelihood
  ☆26Updated 3 years ago
• BioJulia / XAM.jl
  Parse and process SAM and BAM formatted files
  ☆27Updated last month
• OpenMendel / MendelImpute.jl
  OpenMendel package for haplotyping and imputation
  ☆24Updated this week
• BioJulia / BioTutorials
  Tutorial Notebooks of BioJulia
  ☆30Updated last year
• BioJulia / FMIndexes.jl
  FM-index for full-text search
  ☆20Updated 2 years ago
• scverse / Muon.jl
  Muon for Julia
  ☆26Updated 6 months ago
• mmkim1210 / GeneticsMakie.jl
  🧬High-performance genetics- and genomics-related data visualization using Makie.jl
  ☆78Updated 3 months ago
• kdyrhage / GenomicMaps.jl
  Julia package for visualising genomic data
  ☆15Updated 8 months ago
• andreasottoriva / neutral-tumor-evolution
  Stochastic simulation of next-generation sequencing data from neutrally evolving tumors
  ☆10Updated 7 years ago
• menchelab / BioProfiling.jl
  A flexible Julia toolkit for high-dimensional cellular profiles
  ☆13Updated last year
• BioJulia / BioServices.jl
  Julia interface to APIs for various bio-related web services
  ☆21Updated last year
• GSEA-MSigDB / GSEA2.jl
  Julia implementation of the next generation GSEA 🏔️
  ☆21Updated 3 weeks ago
• BioJulia / KmerAnalysis.jl
  K-mer counting algorithms and count-data utilities for the BioJulia framework
  ☆12Updated last year
• rasmushenningsson / VariantCallFormat.jl
  Read and write VCF and BCF files
  ☆13Updated 5 months ago
• Tchanders / NetworkInference.jl
  Methods for inferring undirected networks from data
  ☆43Updated 3 years ago
• rikenbit / OnlinePCA.jl
  Online Principal Component Analysis
  ☆21Updated 2 years ago
• HaojiaWu / CellScopes.jl
  A Julia package for single cell and spatial data analysis
  ☆26Updated 2 weeks ago
• tlnagy / Crispulator.jl
  ✂️ Pooled CRISPR screen optimization tool
  ☆17Updated 8 months ago
• LCSB-BioCore / GigaSOM.jl
  Huge-scale, high-performance flow cytometry clustering in Julia
  ☆31Updated last year
• BioJulia / SingleCellProjections.jl
  Analysis of Single Cell Expression data in Julia
  ☆17Updated 3 weeks ago
• maren-ha / scVI.jl
  A Julia package for fitting VAEs to single-cell data using count distributions.
  ☆22Updated 11 months ago
• BioJulia / BGZFStreams.jl
  BGZF Stream
  ☆13Updated last year
• phaverty / RLEVectors.jl
  Run Length Encoded vectors for julia, inspired by BioConductor.
  ☆20Updated 8 months ago
• OpenMendel / VCFTools.jl
  Julia utilities for handling VCF files
  ☆18Updated 5 months ago
• BioJulia / ReadDatastores.jl
  Datastores for reads, not your papa's FASTQ files.
  ☆11Updated last year
• BioJulia / BioCore.jl
  Core types and interfaces for BioJulia packages
  ☆28Updated 5 years ago
• BioJulia / BioAlignments.jl
  Sequence alignment tools
  ☆60Updated last month
• BioJulia / BioGenerics.jl
  Generic methods, types and modules for the BioJulia ecosystem.
  ☆12Updated 2 months ago
• EcoJulia / Microbiome.jl
  For analysis of microbiome and microbial community data
  ☆47Updated 8 months ago