clindet / bget
Portable command-line tool to query bioinformatics APIs, data, databases and files.
☆88Updated last year
Related projects ⓘ
Alternatives and complementary repositories for bget
- 基于rstudio、code-server、jupyter-lab的dockerfile，用于快速搭建数据分析环境。☆56Updated 2 years ago
- Multiscale embedded gene co-expression network analysis☆48Updated 10 months ago
- 🍪 SEnsible Step-wise Analysis of DNA MEthylation BeadChips☆62Updated 2 weeks ago
- A comprehensive R package to construct interactive and reproducible biological data analysis applications based on the R platform☆56Updated last year
- GENome Organisation Visual Analytics☆70Updated 8 months ago
- ☆29Updated 5 years ago
- DEG analysis and KEGG/GO enrichment analysis☆66Updated 6 years ago
- Code and analysis pipeline for Smart-seq3 (Hagemann-Jensen et al. 2020).☆50Updated 3 years ago
- Links to all data science, genomics, and other notes☆46Updated 4 months ago
- Create KEGG.db Package☆58Updated last year
- A R package and executable for the preprocessing, statistical analysis, and downstream testing and visualization of differentially methyl…☆39Updated last year
- Bayesian network plot for the enrichment analysis results☆60Updated last month
- An integrated R package to evaluate periodicity in large scale data☆26Updated 2 years ago
- Transcriptomics Visualization R package.☆58Updated 10 months ago
- A step-by-step tutorial for Weighted correlation network analysis (WGCNA)☆61Updated 2 years ago
- Streamlining SLAM-seq analysis with ultra-high sensitivity☆39Updated 6 months ago
- The Subread software package is a tool kit for processing next-gen sequencing data. It includes Subread aligner, Subjunc exon-exon juncti…☆31Updated last year
- Transcript quantification import for modular pipelines☆136Updated 7 months ago
- TPMCalculator quantifies mRNA abundance directly from the alignments by parsing BAM files☆124Updated 5 months ago
- From RNA-seq raw reads to enriched pathways by DEGs☆31Updated 6 months ago
- Scripts for paper entitled "Limits in the detection of m6A changes using MeRIP/m6A-seq☆46Updated 4 years ago
- GO-terms Semantic Similarity Measures☆60Updated 3 weeks ago
- The GenePattern Server web application☆35Updated last week
- Translate Words or Sentences via Online Translators☆46Updated this week
- Full-length transcriptome splicing and mutation analysis☆73Updated 4 months ago
- Light-weight Snakemake workflow for preprocessing and statistical analysis of RNA-seq data☆161Updated last month
- ☆68Updated 2 months ago
- GREAT Analysis - Functional Enrichment on Genomic Regions☆85Updated 3 months ago
- Biomedical knowledge mining using GOSemSim and clusterProfiler☆72Updated last year
- RNA-seq data analysis practical☆60Updated 10 years ago