chenxingqiang / alphafold2-codecsLinks
A C, C++, Python project focusing on Docking analysis, Source code, Blogs, Data availability, References.
☆26Updated 2 weeks ago
Alternatives and similar repositories for alphafold2-codecs
Users that are interested in alphafold2-codecs are comparing it to the libraries listed below
Sorting:
- Pytorch/Python3 implementation of DeepAccNet, protein model accuracy evaluator.☆90Updated 4 years ago
- ☆52Updated last year
- Code for our paper "Protein sequence design with a learned potential"☆81Updated 2 years ago
- Universal framework for physically based computational protein design☆35Updated 2 years ago
- Codebase for our preprint using trRosetta to design proteins with discontinuous functional sites, found here: https://www.biorxiv.org/con…☆16Updated 4 years ago
- ☆73Updated 5 years ago
- Fork of matteofigliuzzi/bmDCA repository for Boltzmann-machine Direct Coupling Analysis (bmDCA).☆35Updated 5 years ago
- ☆35Updated 4 years ago
- Graphinity: Equivariant Graph Neural Network Architecture for Predicting Change in Antibody-Antigen Binding Affinity☆56Updated 5 months ago
- ☆29Updated 5 years ago
- ☆114Updated 3 years ago
- Making Protein folding accessible to all!☆24Updated last year
- Improved protein complex prediction with AlphaFold-multimer by denoising the MSA profile☆70Updated last year
- Code and data used in https://doi.org/10.1101/2021.08.01.454656☆54Updated 3 years ago
- ☆90Updated 3 years ago
- ☆25Updated 3 years ago
- Tool for modelling the CDRs of antibodies☆50Updated 2 years ago
- Help file for running the scripts to learn and evaluate graph convolution networks for epitope and paratope prediction☆34Updated 5 years ago
- ☆27Updated last month
- Open source code for AlphaFold.☆39Updated 2 years ago
- ☆42Updated 2 years ago
- Code of our JC paper: "Structure-aware protein solubility prediction from sequence through graph convolutional network and predicted cont…☆76Updated 3 years ago
- Antibody paratope prediction using Graph Neural Networks with minimal feature vectors☆37Updated 2 years ago
- RosettaDesign using PyRosetta☆33Updated 6 years ago
- Antibody-Antigen Docking and Affinity Benchmark☆75Updated 5 years ago
- Computer aided proximal decaging as a universal strategy for temporal protein activation☆24Updated 6 months ago
- DLPacker☆31Updated last year
- Structure-based self-supervised learning enables ultrafast prediction of stability changes upon mutations☆82Updated 4 months ago
- An accurate and efficient protein sequence design approach☆25Updated 8 months ago
- A series of scripts that facilitate the prediction of protein structures in multiple conformations using AlphaFold2☆98Updated 2 years ago