☆13Aug 14, 2026Updated 2 months ago
Alternatives and similar repositories for PyPetaKit5D
Users that are interested in PyPetaKit5D are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- ☆61Updated this week
- ☆12Oct 16, 2026Updated 3 weeks ago
- Software for the reconstruction of multi-view microscopic acquisitions like Selective Plane Illumination Microscopy (SPIM) Data☆35Updated this week
- An open-source Python toolkit for large-scale fluorescence microscopy data alignment and fusion.☆11Jul 29, 2026Updated 3 months ago
- Running compute-intense parts of BigStitcher distributed☆32Updated this week
- Open source password manager - Proton Pass • AdSecurely store, share, and autofill your credentials with Proton Pass, the end-to-end encrypted password manager trusted by millions.
- ImageJ plugins for blind decomposition of fluorencence microscopy data☆10Mar 24, 2015Updated 11 years ago
- Modern Bio-Formats wrapper with clean lazy Python API☆24Updated this week
- Acquire: a multi-camera video streaming software focusing on microscopy☆26Oct 30, 2024Updated 2 years ago
- Repo for the CZI Imaging Team's napari plugin Alfa Cohort collaboration☆11May 14, 2021Updated 5 years ago
- Workflows that utilise BrainGlobe tools to perform data analysis and visualisation.☆13Updated this week
- ☆19Updated this week
- Rust extension module for FIJI-like colormapping and channel blending☆21Jun 24, 2026Updated 4 months ago
- ☆13Jun 18, 2026Updated 4 months ago
- ☆10Dec 11, 2024Updated last year
- Managed Database hosting by DigitalOcean • AdPostgreSQL, MySQL, MongoDB, Kafka, Valkey, and OpenSearch available. Automatically scale up storage and focus on building your apps.
- ☆14Dec 18, 2024Updated last year
- Implementation of next-generation file format (NGFF) specifications for storing bioimaging data in the cloud.☆263Updated this week
- Tools for distributed alignment of massive images☆95Updated this week
- A common data structure and basic tools for multi-object tracking.☆15Oct 16, 2026Updated 3 weeks ago
- Lectures for a napari training course☆53Aug 30, 2023Updated 3 years ago
- A Python toolbox for aligning / fusing / stitching large multi-view / multi-positioning image datasets in 2-3D.☆135Oct 22, 2026Updated 2 weeks ago
- Google Colab notebook for Cellpose☆11Aug 21, 2025Updated last year
- dask empowered fast4dreg☆17Mar 11, 2026Updated 7 months ago
- MorphoFeatures code and data☆23Oct 21, 2026Updated 2 weeks ago
- Serverless GPU API endpoints on Runpod - Get Bonus Credits • AdSkip the infrastructure headaches. Auto-scaling, pay-as-you-go, no-ops approach lets you focus on innovating your application.
- Combined Repos from DAIN and Zooming SlowMo☆21Jul 9, 2023Updated 3 years ago
- Python wrapper for cudaDecon - GPU accelerated 3D deconvolution for microscopy☆74Updated this week
- ☆13Feb 27, 2024Updated 2 years ago
- Parts list and build instructions for our high-numerical-aperture lightsheet. Read the publication here: https://andrewgyork.github.io/hi…☆22Jun 21, 2024Updated 2 years ago
- Streaming directly to Zarr on the file system or S3☆36Updated this week
- ☆10Oct 23, 2019Updated 7 years ago
- Package for working with OME-Zarr and NIFTI images in a unified manner, with a focus on spatial transformations☆11Oct 27, 2026Updated last week
- Browse, share, and publish OME-Zarr data☆32Updated this week
- napari plugin to open CZI image files and their metadata☆17Updated this week
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- A dataset for loading zarr files to be used in machine learning training pipelines☆39Jan 5, 2026Updated 10 months ago
- Pythonic and parallelizable I/O for N-dimensional imaging data with OME metadata☆56Updated this week
- Old academic project for my PhD - no longer maintained by me: fast gaussian and derivative convolutional filters☆10May 1, 2019Updated 7 years ago
- GPU-based 3D non-rigid volumetric registration☆51Aug 26, 2025Updated last year
- Cell tracking and segmentation software☆210Updated this week
- litemind is a Python library designed to empower developers to build sophisticated conversational agents and tools. It provides a flexibl…☆19Apr 5, 2026Updated 7 months ago
- Point-Scanning Super-Resolution 2☆12Apr 16, 2026Updated 6 months ago