caponetto / bhcLinks
Python implementation of Bayesian hierarchical clustering and Bayesian rose trees algorithms.
☆18Updated 4 years ago
Alternatives and similar repositories for bhc
Users that are interested in bhc are comparing it to the libraries listed below
Sorting:
- generalized principal component analysis (GLM-PCA) implemented in python☆60Updated 4 years ago
- Here we address the global structure preservation by tSNE and UMAP☆47Updated 5 years ago
- Tools for munging genomic data☆21Updated 6 years ago
- Network inference by fusing data from diverse distributions☆14Updated 9 years ago
- A Library for Denoising Single-Cell Data with Random Matrix Theory☆37Updated 2 years ago
- Python Matrix Factorization Module☆14Updated 8 years ago
- ☆21Updated 8 years ago
- Monet: An open-source Python package for analyzing scRNA-Seq data using PCA-based latent spaces☆40Updated 4 years ago
- Vintage Sparse PCA for Semi-Parametric Network Analysis☆26Updated 3 months ago
- Tools for building and manipulating graphs in Python☆45Updated last month
- Systematically learn and evaluate manifolds from high-dimensional data☆104Updated last month
- Python Wrapper for FIt-SNE☆45Updated 4 years ago
- A data analysis package for high-dimensional, multi-block data.☆12Updated 3 years ago
- Fast Inference of Networks from Directed Regulations☆22Updated 2 years ago
- Residual Component Analysis☆10Updated 8 years ago
- (Python, R, C) Poisson matrix factorization (non-Bayesian version) (recommender systems)☆47Updated 6 months ago
- Volume-regularized NMF☆17Updated 3 years ago
- Attraction-Repulsion Spectrum in Neighbor Embeddings☆31Updated 3 years ago
- Online Principal Component Analysis☆24Updated this week
- Probabilistic single-cell pseudotime with Edward+Tensorflow☆12Updated 8 years ago
- Categorical Variational Autoencoders☆24Updated 3 years ago
- A fast, accurate, and modularized dimensionality reduction approach based on diffusion harmonics and graph layouts. Escalates to millions…☆48Updated 4 years ago
- R package for dimensionality reduction of small datasets☆69Updated last month
- Picasso: a methods for embedding points in 2D in a way that respects distances while fitting a user-specified shape.☆71Updated 2 months ago
- Out-of-Core Principal Component Analysis☆19Updated 7 years ago
- Similarity search in heterogeneous knowledge graphs using meta paths.☆29Updated 2 years ago
- Analyzing RNA-Seq with approximate likelihood☆26Updated 4 years ago
- Genie: Fast and Robust Hierarchical Clustering with Noise Point Detection - in Python and R☆67Updated last week
- Fast embedding ot multidimensional datasets, great for cytometry data☆26Updated 10 months ago
- Code for the paper on t-SNE with variable degree of freedom☆25Updated 5 years ago