AlonLabWIS / ParTILinks
A Matlab package to perform Pareto Task Inference (ParTI), which infers tasks from high-dimensional datasets.
☆14Updated 5 years ago
Alternatives and similar repositories for ParTI
Users that are interested in ParTI are comparing it to the libraries listed below
Sorting:
- A Python package for gene network analysis☆32Updated 3 years ago
- python implementation of the PAGE algorithm☆18Updated last year
- ☆20Updated 5 months ago
- Tied Diffusion for Subnetwork Discovery (TieDIE)☆37Updated 3 years ago
- Multi-study integration of cellular trajectories☆19Updated 5 years ago
- splicing and feature maps for RBPs☆25Updated 3 years ago
- A spatial genome aligner for analyzing multiplexed DNA-FISH imaging data.☆18Updated 2 years ago
- draw sequence logos tailored to deep mutational scanning (DMS) data☆12Updated 2 years ago
- Annotated sequence data☆11Updated 8 months ago
- High-definition modeling of chromatin + transcriptomics data☆25Updated 6 months ago
- Smooth-quantile Normalization Adaptation for Inference of co-expression Links☆16Updated 2 years ago
- A python package for showing JBrowse views☆26Updated last year
- ImReP is a computational method for rapid and accurate profiling of the adaptive immune repertoire from regular RNA-Seq data.☆29Updated 6 years ago
- Comparison of Adaptive Immune Receptor Repertoires☆28Updated 9 months ago
- Feature-rich Python implementation of the tximport package for gene count estimation.☆37Updated last week
- Benchmarking long-read RNA-seq analysis tools☆27Updated 8 months ago
- GOMCL: a toolkit to cluster, evaluate, and extract non-redundant associations of Gene Ontology-based functions☆22Updated 2 years ago
- Identification of viral RdRPs in single-cell RNA sequencing data☆12Updated 3 months ago
- ☆21Updated last year
- Extension of the WGCNA program to improve the eigengene similarity of modules and increase the overall number of genes in modules.☆65Updated 4 years ago
- a python package for KEGG pathway enrichment analysis with multiple gene lists.☆36Updated 7 years ago
- A Computational Workflow for Designing Libraries of sgRNAs for CRISPR-Mediated Base Editing, and much more☆19Updated last year
- Flexible and efficient tests for evidence of positive selection anywhere in the cancer genome.☆26Updated 3 years ago
- Summary statistics for repertoires☆17Updated 2 years ago
- ☆35Updated 3 years ago
- Network Visualization using both GUI and Programming☆29Updated 5 months ago
- Fast Gene Set Enrichment Analysis (GSEA) implementation of the prerank algorithm. Use Loess interpolation of bimodal ES distribution for …☆55Updated 5 months ago
- Core functionality of the CGAT code☆33Updated 2 months ago
- ☆19Updated 11 months ago
- ☆21Updated last year