Alternatives and similar repositories for UNRAVEL

Users that are interested in UNRAVEL are comparing it to the libraries listed below

• brainglobe / brainglobe-registration
  Registration to BrainGlobe atlases in napari using Elastix
  ☆22Updated 2 weeks ago
• brainglobe / cellfinder-napari
  Efficient cell detection in large images using cellfinder in napari
  ☆22Updated last year
• brainglobe / brainrender-napari
  A napari plugin to render BrainGlobe atlases and associated data as layers.
  ☆22Updated 2 weeks ago
• brainglobe / brainglobe-space
  Anatomical space conventions made easy.
  ☆10Updated 2 weeks ago
• brainglobe / brainglobe-napari-io
  Read and write files from the BrainGlobe neuroanatomy suite
  ☆14Updated 2 weeks ago
• bkntr / brainways
  Brainways
  ☆21Updated last month
• danionella / warpfield
  GPU-based 3D non-rigid volumetric registration
  ☆41Updated last month
• dterstege / FASTMAP
  ImageJ Plugin for Flexible Atlas Segmentation Tool for Multi-Area Processing
  ☆23Updated 3 years ago
• brainglobe / brainglobe-segmentation
  Segmentation of anatomical structures in a common coordinate space
  ☆33Updated last week
• Gubra-ApS / LSFM-mouse-brain-atlas
  ☆18Updated 3 years ago
• NicoKiaru / ABBA-Python
  How to use Aligning Big Brains and Atlases with Python
  ☆15Updated 2 years ago
• brainglobe / brainglobe-template-builder
  Build unbiased anatomical templates from individual images
  ☆12Updated 2 weeks ago
• brainglobe / brainreg-napari
  Automated 3D brain registration in napari with support for multiple species and atlases.
  ☆16Updated last year
• brainglobe / slicereg
  A 2D-3D histological brain slice registration application for mouse, rat, zebrafish brains.
  ☆36Updated last year
• brainglobe / brainglobe-heatmap
  Rendering anatomical heatmaps with brainrender and matplotlib
  ☆44Updated 2 weeks ago
• brainglobe / napari-brainreg
  Visualise brainreg registration output
  ☆10Updated 3 years ago
• brainglobe / imio
  Loading and saving of image data.
  ☆10Updated last year
• int-brain-lab / atlas
  Brain flatmaps generation
  ☆11Updated 3 years ago
• neuroinformatics-unit / course-swc-timeseries-analysis-2023
  ☆10Updated 2 years ago
• easy-electrophysiology / easy-electrophysiology-analysis
  Analysis code for Easy Electrophysiology (www.easyelectrophysiology.com)
  ☆17Updated 7 months ago
• MouseLand / neuropop
  analysis tools for large-scale neural recordings
  ☆15Updated 6 months ago
• bf777 / MesoNet
  A python toolbox for locating and exporting brain regions from mouse brain images.
  ☆12Updated 11 months ago
• brainglobe / bg-brainrender-gui
  A GUI built on brainrender: visualise brain regions, neurons and labelled cells.
  ☆12Updated 4 years ago
• alihaydaroglu / suite3d
  Fast, volumetric cell detection. In development.
  ☆20Updated 4 months ago
• neuroinformatics-unit / actions
  Re-usable GitHub Action scripts
  ☆12Updated 2 weeks ago
• cogilab / AMaSiNe
  Implementation of "Precise Mapping of Single Neurons by Calibrated 3D Reconstruction of Brain Slices Reveals Topographic Projection in Mo…
  ☆16Updated 2 years ago
• neuroinformatics-unit / HowTo
  NIU website on common software problems and their troubleshooting
  ☆10Updated last week
• SWC-Advanced-Microscopy / BakingTray
  Serial-section automated anatomy extension for ScanImage
  ☆16Updated 2 months ago
• albert597 / TRAILMAP
  ☆45Updated 5 years ago
• neuroscales / nifti-zarr
  A draft specification for the nifti-zarr format
  ☆16Updated 6 months ago