bittremieux-lab / GLEAMSLinks
GLEAMS is a Learned Embedding for Annotating Mass Spectra.
☆26Updated 2 years ago
Alternatives and similar repositories for GLEAMS
Users that are interested in GLEAMS are comparing it to the libraries listed below
Sorting:
- MS/MS prediction for peptides☆24Updated 4 years ago
- Metabolome Annotation Workflow☆25Updated last year
- ☆25Updated last year
- Pipeline for de novo peptide sequencing (Novor, DeepNovo, SMSNet, PointNovo, Casanovo) and assembly with ALPS.☆41Updated last year
- Transformer deep learning model for de novo sequencing of data-independent acquisition mass spectrometry data☆23Updated 6 months ago
- Metabolomics software for database-assisted deconvolution of MS/MS spectra☆19Updated last year
- pathway and network analysis for metabolomics☆42Updated last year
- R package for optimized LC-MS spectra processing☆25Updated 2 weeks ago
- MSBooster allows users to add deep learning-based features to .pin files before Percolator PSM rescoring☆19Updated this week
- MassDash: A web-based dashboard for streamlined DIA-MS visualization, analysis, prototyping, and optimization☆20Updated this week
- Analysis platform for large-scale dose-dependent data☆25Updated last week
- A Python interface to proteomics data repositories☆35Updated 2 months ago
- ☆11Updated 3 years ago
- asari, metabolomics data preprocessing☆51Updated 3 weeks ago
- Knowledge-guided multilayer network approach is executed in MetDNA2☆16Updated 2 years ago
- Fast and flexible semi-supervised learning for peptide detection in Python☆48Updated 6 months ago
- Hierarchical orderings for mass spectrometry data. Canonically pronounced "chemis-tree".☆31Updated 2 years ago
- MS2Query - machine learning assisted library querying of MS/MS spectra☆46Updated 3 months ago
- Python package for investigating the structural context of PTMs☆28Updated 7 months ago
- ☆17Updated 6 years ago
- A global network optimization approach for untargeted LC-MS metabolomics data annotation and metabolite discovery☆47Updated 2 years ago
- A workflow for metabolite identification and accurate profiling in multidimensional LC-IM-MS-DIA measurements. DOI: 10.5281/zenodo.☆16Updated 2 years ago
- ☆64Updated last year
- Python pipeline for metabolomics data preprocessing, QC, standardization and annotation☆15Updated last week
- Spectral library searching using approximate nearest neighbor techniques.☆44Updated 3 months ago
- ☆20Updated 2 years ago
- Using MASST or fastMASST, adding metadata onto a tree ontology for microbes☆21Updated this week
- The state of the art Deep CNN neural network for de novo sequencing of tandem mass spectra☆39Updated 9 months ago
- ☆14Updated 2 years ago
- Python package for processing direct-infusion mass spectrometry-based metabolomics and lipidomics data☆20Updated 2 years ago