bioperl / bioperl-liveLinks
Core BioPerl 1.x code
☆313Updated 4 months ago
Alternatives and similar repositories for bioperl-live
Users that are interested in bioperl-live are comparing it to the libraries listed below
Sorting:
- GenomeTools genome analysis system.☆331Updated 2 months ago
- Genome Assembly and Annotation Service code☆217Updated 2 years ago
- RepeatMasker is a program that screens DNA sequences for interspersed repeats and low complexity DNA sequences.☆288Updated 3 weeks ago
- Artemis is a free genome viewer and annotation tool that allows visualization of sequence features and the results of analyses within the…☆261Updated 3 weeks ago
- De-Novo Repeat Discovery Tool☆230Updated 5 months ago
- PASA software☆197Updated 11 months ago
- Transcript assembly and quantification for RNA-Seq☆477Updated 2 weeks ago
- FASTA/FASTQ pre-processing programs☆194Updated 3 years ago
- HyPhy: Hypothesis testing using Phylogenies☆247Updated last week
- [THIS REPO IS DEPRECATED] see newer repos: https://github.com/broadinstitute/viral-core https://github.com/broadinstitute/viral-assemble …☆195Updated last year
- TransDecoder source☆301Updated 3 months ago
- Intuitive graphical web interface for running BLAST bioinformatics tool (i.e. have your own custom NCBI BLAST site!)☆293Updated last month
- Fast genome analysis from unassembled short reads☆305Updated last year
- Assemble large genomes using short reads☆329Updated 9 months ago
- A fast approximate aligner for long DNA sequences☆286Updated last year
- Program for analysing NGS data.☆251Updated 10 months ago
- Welcome to the mothur project, initiated by Dr. Patrick Schloss and his software development team in the Department of Microbiology & Imm…☆274Updated this week
- ⚡♠️ Assemble bacterial isolate genomes from Illumina paired-end reads☆248Updated last month
- software tools for haplotype assembly from sequence data☆226Updated 11 months ago
- ☆345Updated 10 months ago
- Bayesian haplotype-based mutation calling☆322Updated last week
- Next generation sequencing reads de novo assembler.☆239Updated 3 months ago
- Genome annotation with AUGUSTUS☆322Updated 4 months ago
- Extensive de-novo TE Annotator☆422Updated 3 months ago
- Sequence-to-graph mapper and graph generator☆466Updated 5 months ago
- Mummer alignment tool☆544Updated 11 months ago
- A tool to circularize genome assemblies☆250Updated last year
- pycoQC computes metrics and generates Interactive QC plots from the sequencing summary report generated by Oxford Nanopore technologies b…☆284Updated last year
- Pilon is an automated genome assembly improvement and variant detection tool☆374Updated 3 years ago
- Read trimming tool for Illumina NGS data.☆149Updated 10 years ago