Core BioPerl 1.x code
☆316Sep 3, 2025Updated 6 months ago
Alternatives and similar repositories for bioperl-live
Users that are interested in bioperl-live are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- BioPerl wrappers☆36Apr 25, 2021Updated 4 years ago
- The BioPerl Web site: http://bioperl.org☆14Aug 29, 2019Updated 6 years ago
- BioPerl scripts and utilities☆11Sep 2, 2025Updated 6 months ago
- reimplementation of BioPerl classes in Raku (e.g. the language formerly known as Perl6)☆48Sep 30, 2018Updated 7 years ago
- An assembly workflow for analysing data in the Earth Biogenome Project pilot project.☆15Updated this week
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting with the flexibility to host WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Cloudways by DigitalOcean.
- Practical, reusable scripts for bioinformatics☆102Feb 12, 2019Updated 7 years ago
- Build external dependencies for use in CPAN☆17Aug 4, 2025Updated 7 months ago
- FASTA/FASTQ pre-processing programs☆199Mar 4, 2022Updated 4 years ago
- GenomeThreader gene prediction software.☆14Nov 10, 2025Updated 4 months ago
- Inverted Repeats Finder: a program to analyze DNA and RNA sequences☆21Feb 21, 2025Updated last year
- An attempt to help anyone interested in using Perl for Bioinformatics☆35Dec 4, 2019Updated 6 years ago
- ☆347Mar 4, 2025Updated last year
- TransDecoder source☆302Mar 22, 2026Updated last week
- Genome Scripts used in fungal comparative genomics☆65Sep 25, 2020Updated 5 years ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting with the flexibility to host WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Cloudways by DigitalOcean.
- BLAST-Like Alignment Tool☆23Jan 11, 2019Updated 7 years ago
- Automates running of OrthoMCL software from http://orthomcl.org/common/downloads/software/v2.0/☆80Jul 31, 2020Updated 5 years ago
- parallelized blat with multi-threads support☆56Jan 23, 2025Updated last year
- Genome-scale protein function classification☆374Updated this week
- RepeatMasker is a program that screens DNA sequences for interspersed repeats and low complexity DNA sequences.☆299Dec 17, 2025Updated 3 months ago
- Fast genome analysis from unassembled short reads☆317Apr 8, 2024Updated last year
- Accelerated BLAST compatible local sequence aligner.☆1,261Updated this week
- ☆13Nov 13, 2023Updated 2 years ago
- A pure Perl HTTP proxy☆19May 14, 2020Updated 5 years ago
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click and start building anything your business needs.
- Cutadapt removes adapter sequences from sequencing reads☆574Mar 17, 2026Updated last week
- Synteny and Rearrangement Identifier☆454Mar 17, 2026Updated last week
- Burrow-Wheeler Aligner for short-read alignment (see minimap2 for long-read alignment)☆1,720Mar 22, 2025Updated last year
- Prodigal Gene Prediction Software☆531Jan 23, 2024Updated 2 years ago
- Perl module to configure and build modules (what backs most Build.PLs)☆34Aug 21, 2025Updated 7 months ago
- A cross-platform and ultrafast toolkit for FASTA/Q file manipulation☆1,532Feb 27, 2026Updated last month
- Just Annotate My Genome☆19Sep 17, 2024Updated last year
- Tool set for processing fasta/fastq/table formated data. Usually they are perl scripts.☆56Updated this week
- Trinity RNA-Seq de novo transcriptome assembly☆885Feb 7, 2025Updated last year
- End-to-end encrypted email - Proton Mail • AdSpecial offer: 40% Off Yearly / 80% Off First Month. All Proton services are open source and independently audited for security.
- ☆21Sep 22, 2022Updated 3 years ago
- Phylogenetic analysis of multi-species genome sequence alignments to identify conserved protein-coding regions☆71Oct 16, 2023Updated 2 years ago
- Ultra-fast de novo assembler using long noisy reads☆136Feb 24, 2021Updated 5 years ago
- the Generic Genome Browser☆49Apr 10, 2023Updated 2 years ago
- BRAKER is a pipeline for fully automated prediction of protein coding gene structures with GeneMark-ES/ET/EP/ETP and AUGUSTUS in novel eu…☆451Oct 20, 2025Updated 5 months ago
- Another Gtf/Gff Analysis Toolkit https://nbisweden.github.io/AGAT/☆567Jan 13, 2026Updated 2 months ago
- Guided synteny alignment between duplicated genomes (within specified quota constraint)☆59Sep 5, 2017Updated 8 years ago