bioperl / bioperl-runLinks
BioPerl wrappers
☆36Updated 4 years ago
Alternatives and similar repositories for bioperl-run
Users that are interested in bioperl-run are comparing it to the libraries listed below
Sorting:
- The BioPerl Web site: http://bioperl.org☆14Updated 6 years ago
- BioPerl scripts and utilities☆11Updated 2 weeks ago
- The Ensembl Compara Perl API and SQL schema☆54Updated this week
- A 3'-end adapter contaminant trimmer☆95Updated 7 years ago
- A tool set for short variant discovery in genetic sequence data.☆201Updated 4 years ago
- the Generic Genome Browser☆49Updated 2 years ago
- Tool for stripping adaptors and/or merging paired reads with overlap into single reads.☆144Updated 8 years ago
- Overlap assembler of paired-end DNA sequences generated by Illumina☆22Updated 9 years ago
- The Ensembl Core Perl API and SQL schema☆80Updated last month
- Practical, reusable scripts for bioinformatics☆102Updated 6 years ago
- SURPI☆85Updated 9 years ago
- Plugins for the Ensembl Variant Effect Predictor (VEP)☆157Updated 3 weeks ago
- Git repo for Bio::HTS module on CPAN, providing Perl links into HTSlib☆25Updated 8 months ago
- The Ensembl Variation Perl API and SQL schema☆29Updated 3 weeks ago
- ☆95Updated 2 years ago
- Annocript is a pipeline for the annotation of de-novo generated transcriptomes. It executes BLAST analysis with UniProt, NCBI Conserved …☆56Updated 5 years ago
- Automatically exported from code.google.com/p/ea-utils☆96Updated 2 years ago
- This is *NOT* the official repository of samtools.☆48Updated 8 years ago
- PAired-eND Assembler for DNA sequences☆136Updated 4 years ago
- Bioconductor package "ballgown", devel version. Isoform-level differential expression analysis in R.☆148Updated 4 years ago
- Platypus Variant Caller☆108Updated last year
- Variant calling and somatic mutation/CNV detection for next-generation sequencing data☆163Updated 2 years ago
- Algorithms to compute DNA complexity☆34Updated 3 years ago
- Toolkit for processing TAB-delimited format☆62Updated 11 months ago
- Toolkit to analyze genomic variation data, built on the GATK with Clojure☆66Updated 9 years ago
- Biopieces is a bioinformatic framework of tools easily used and easily created.☆142Updated 7 years ago
- A WGS de novo assembler based on the FMD-index for large genomes☆74Updated 11 years ago
- ☆63Updated 4 years ago
- A powerful toolset for genome arithmetic.☆142Updated 4 years ago
- NextSeq specific bcl2fastq2 wrapper.☆55Updated 4 years ago