bcdev / jzarrLinks
A Java implementation of the API offered by the Python zarr package
☆35Updated 7 months ago
Alternatives and similar repositories for jzarr
Users that are interested in jzarr are comparing it to the libraries listed below
Sorting:
- Pydantic models for Zarr☆43Updated 3 weeks ago
- Illustrations created by Henning Falk for the Zarr community☆43Updated 11 months ago
- Not HDF5☆193Updated 3 weeks ago
- serve Zarr datasets via HTTP☆31Updated 2 years ago
- A CodecPipeline for zarr-python backed by the zarrs Rust crate☆59Updated this week
- ☆42Updated last year
- scalable multiscale image pyramids in python☆29Updated last year
- Zarr core protocol for storage and retrieval of N-dimensional typed arrays☆103Updated 3 months ago
- ☆20Updated last month
- Pydantic models for OME-NGFF☆24Updated 3 months ago
- A minimal Zarr image viewer based on Viv.☆175Updated last week
- ☆17Updated 3 years ago
- ☆18Updated 3 weeks ago
- Create web-based OME-Zarr galleries☆22Updated 2 months ago
- Fusing image tiles with dask array's map_blocks☆30Updated last year
- A minimal Python package for reading, writing and validating OME-Zarr (meta)data☆36Updated last week
- Experimental micro-service for implementing the Zarr spec over HTTP☆20Updated last month
- Generate a multiscale, chunked, multi-dimensional spatial image data structure that can serialized to OME-NGFF.☆54Updated last month
- Streaming directly to Zarr on the file system or S3☆24Updated last month
- A writer and reader for NGFF OME-Zarr datasets☆14Updated 4 years ago
- native Python dataclasses for the OME data model☆65Updated 3 weeks ago
- Performance benchmarks of Zarr V3 implementations☆17Updated this week
- A lean and kind Open Microscopy Environment (OME) Next Generation File Format (NGFF) Zarr implementation.☆55Updated this week
- A nextflow based tool that wraps bfconvert and bioformats2raw to convert image data collections to OME-TIFF and OME-Zarr, respectively, i…☆25Updated 9 months ago
- Implementation of the Zarr core protocol (version 2 and 3) based on xtensor.☆47Updated 3 years ago
- A napari plugin for zarr backed OME-NGFF images☆42Updated 3 weeks ago
- Basic example of using OME-Zarr in a Nextflow pipeline☆19Updated 5 months ago
- A 3D interactivity toolbox for napari☆37Updated 6 months ago
- Simple, fast-loading, n-dimensional array viewer with minimal dependencies.☆87Updated this week
- Paint segmentations directly to on-disk/remote zarr arrays☆15Updated last year