Public version for DistPepFold
☆10Jul 17, 2025Updated 10 months ago
Alternatives and similar repositories for DistPepFold
Users that are interested in DistPepFold are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- ☆22Mar 28, 2024Updated 2 years ago
- App for serotonergic targets☆12Jan 8, 2026Updated 4 months ago
- Multiscale Simulation Tool for Backmapping☆22Mar 13, 2026Updated 2 months ago
- PairMap: An Intermediate Insertion Approach for Improving the Accuracy of Relative Free Energy Perturbation Calculations for Distant Comp…☆17Mar 18, 2026Updated 2 months ago
- Clustering of SES virtual probes for pocket generation and ranking via Isolation Forest☆14Mar 22, 2023Updated 3 years ago
- End-to-end encrypted email - Proton Mail • AdSpecial offer: 40% Off Yearly / 80% Off First Month. All Proton services are open source and independently audited for security.
- DiffDock implementation that adds support for HPC execution using Slurm and Singularity☆26May 22, 2025Updated last year
- The aim of this repository is to provide simple tools to help those working with ColabFold BATCH both for pre and post-processing steps.☆17Jan 29, 2024Updated 2 years ago
- ☆30May 12, 2026Updated last week
- Python based Graphical User Interface for generating input files for and running molecular dynamic simulation.☆10Aug 27, 2024Updated last year
- Code for ColabDock paper☆156May 1, 2025Updated last year
- scripts to find PBD structures for cancer driver proteins☆31Feb 27, 2026Updated 2 months ago
- ☆18Dec 5, 2025Updated 5 months ago
- ☆13Oct 9, 2024Updated last year
- GatorAffinity: Boosting Protein-Ligand Binding Affinity Prediction with Large-Scale Synthetic Structural Data☆32Apr 10, 2026Updated last month
- Serverless GPU API endpoints on Runpod - Get Bonus Credits • AdSkip the infrastructure headaches. Auto-scaling, pay-as-you-go, no-ops approach lets you focus on innovating your application.
- Data and code required to reach the main conclusions of the fastsmcg paper☆10Sep 19, 2023Updated 2 years ago
- Automatically exported from code.google.com/p/pyplif☆10Nov 23, 2018Updated 7 years ago
- ☆10Apr 1, 2024Updated 2 years ago
- Improved protein complex prediction with AlphaFold-multimer by denoising the MSA profile☆72Apr 13, 2026Updated last month
- A toolkit developed to predict and analyze PROTAC-mediated ternary complexes using AlphaFold3 and Boltz-1.☆41Jul 17, 2025Updated 10 months ago
- Tokenizing Loops of Antibodies☆34Nov 23, 2025Updated 6 months ago
- ☆17Apr 28, 2020Updated 6 years ago
- This repository gathers the NNAIMGUI code along with some instructions and readme files.☆11Mar 22, 2024Updated 2 years ago
- Structure prediction and design of proteins with noncanonical amino acids☆132Feb 1, 2026Updated 3 months ago
- Open source password manager - Proton Pass • AdSecurely store, share, and autofill your credentials with Proton Pass, the end-to-end encrypted password manager trusted by millions.
- Bokeh extensions to plot molecules easily☆10Jul 14, 2025Updated 10 months ago
- InteractionDrawer is a JavaScript library for the drawing of highly interactive 2D ligand interaction diagrams.☆28Oct 16, 2023Updated 2 years ago
- ☆11Sep 24, 2020Updated 5 years ago
- init project☆15Jul 20, 2025Updated 10 months ago
- Benchmarking active learning protocols for ligand binding affinity prediction☆13Feb 4, 2024Updated 2 years ago
- ☆14Jul 7, 2024Updated last year
- Cloud GPU supported NAMD3-based binding free energy difference between two small molecules against the same protein target. This is prob…☆29Nov 2, 2025Updated 6 months ago
- Google Colaboratory Notebooks for Computational Biochemistry☆21Jun 15, 2025Updated 11 months ago
- Lightweight induced fit docking☆22May 22, 2023Updated 3 years ago
- Simple, predictable pricing with DigitalOcean hosting • AdAlways know what you'll pay with monthly caps and flat pricing. Enterprise-grade infrastructure trusted by 600k+ customers.
- Python module for identification of conserved water molecules from molecular dynamics trajectories.☆15Updated this week
- pymol implementation of WaterDock with Akshay Sridhar (@akshay-sridhar) and refactoring work by Patrick McCubbin (@mccubbinp)☆11Mar 25, 2024Updated 2 years ago
- ☆32Apr 9, 2024Updated 2 years ago
- Efficient Sampling of PROTAC-Induced Ternary Complexes☆13Jun 3, 2025Updated 11 months ago
- Open source code for AlphaFold.☆39May 6, 2026Updated 2 weeks ago
- Collection of scripts that integrates docking, virtual screening, similarity and molecular modeling programs.☆31Mar 4, 2026Updated 2 months ago
- SIEVE-Score: interaction energy-based virtual screening method based on random forest.☆14Sep 15, 2023Updated 2 years ago